Gene : AL8G21710 A. lyrata v2.1
Defline:  (1 of 11) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1010
Name:  ? AL8G21710 Secondary Identifier:  ? PAC:35950340
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G21710 0.5kb upstream 0.5kb upstream 3139   true scaffold_8: 12026138-12029276 Arabidopsis lyrata
AL8G21710 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 12028777-12029276 Arabidopsis lyrata
AL8G21710 0.5kb downstream 0.5kb downstream 3139   true scaffold_8: 12025638-12028776 Arabidopsis lyrata
AL8G21710 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 12025638-12026137 Arabidopsis lyrata
AL8G21710 1.0kb upstream 1.0kb upstream 3639   true scaffold_8: 12026138-12029776 Arabidopsis lyrata
AL8G21710 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 12028777-12029776 Arabidopsis lyrata
AL8G21710 1.0kb downstream 1.0kb downstream 3639   true scaffold_8: 12025138-12028776 Arabidopsis lyrata
AL8G21710 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 12025138-12026137 Arabidopsis lyrata
AL8G21710 2.0kb upstream 2.0kb upstream 4639   true scaffold_8: 12026138-12030776 Arabidopsis lyrata
AL8G21710 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 12028777-12030776 Arabidopsis lyrata
AL8G21710 2.0kb downstream 2.0kb downstream 4639   true scaffold_8: 12024138-12028776 Arabidopsis lyrata
AL8G21710 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 12024138-12026137 Arabidopsis lyrata
AL8G21710 5.0kb upstream 5.0kb upstream 7639   true scaffold_8: 12026138-12033776 Arabidopsis lyrata
AL8G21710 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 12028777-12033776 Arabidopsis lyrata
AL8G21710 5.0kb downstream 5.0kb downstream 7639   true scaffold_8: 12021138-12028776 Arabidopsis lyrata
AL8G21710 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 12021138-12026137 Arabidopsis lyrata
AL8G21710 10.0kb upstream 10.0kb upstream 12639   true scaffold_8: 12026138-12038776 Arabidopsis lyrata
AL8G21710 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 12028777-12038776 Arabidopsis lyrata
AL8G21710 10.0kb downstream 10.0kb downstream 12639   true scaffold_8: 12016138-12028776 Arabidopsis lyrata
AL8G21710 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 12016138-12026137 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366953 5261 Brassicaceae View MSA
123799269 5264 Brassicales-Malvales View MSA
124351148 5266 SBM View MSA
124250408 5268 Malvidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain