Gene : AL8G20190 A. lyrata v2.1

Defline:  (1 of 1) 5.4.99.31 - Thalianol synthase Genomic Order:  888
Name:  ? AL8G20190 Secondary Identifier:  ? PAC:35948160

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5992 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G20190 0.5kb upstream 0.5kb upstream 8218   true scaffold_8: 10455080-10463297 Arabidopsis lyrata
AL8G20190 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 10455080-10455579 Arabidopsis lyrata
AL8G20190 0.5kb downstream 0.5kb downstream 8218   true scaffold_8: 10455580-10463797 Arabidopsis lyrata
AL8G20190 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 10463298-10463797 Arabidopsis lyrata
AL8G20190 1.0kb upstream 1.0kb upstream 8718   true scaffold_8: 10454580-10463297 Arabidopsis lyrata
AL8G20190 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 10454580-10455579 Arabidopsis lyrata
AL8G20190 1.0kb downstream 1.0kb downstream 8718   true scaffold_8: 10455580-10464297 Arabidopsis lyrata
AL8G20190 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 10463298-10464297 Arabidopsis lyrata
AL8G20190 2.0kb upstream 2.0kb upstream 9718   true scaffold_8: 10453580-10463297 Arabidopsis lyrata
AL8G20190 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 10453580-10455579 Arabidopsis lyrata
AL8G20190 2.0kb downstream 2.0kb downstream 9718   true scaffold_8: 10455580-10465297 Arabidopsis lyrata
AL8G20190 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 10463298-10465297 Arabidopsis lyrata
AL8G20190 5.0kb upstream 5.0kb upstream 12718   true scaffold_8: 10450580-10463297 Arabidopsis lyrata
AL8G20190 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 10450580-10455579 Arabidopsis lyrata
AL8G20190 5.0kb downstream 5.0kb downstream 12718   true scaffold_8: 10455580-10468297 Arabidopsis lyrata
AL8G20190 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 10463298-10468297 Arabidopsis lyrata
AL8G20190 10.0kb upstream 10.0kb upstream 17718   true scaffold_8: 10445580-10463297 Arabidopsis lyrata
AL8G20190 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 10445580-10455579 Arabidopsis lyrata
AL8G20190 10.0kb downstream 10.0kb downstream 17718   true scaffold_8: 10455580-10473297 Arabidopsis lyrata
AL8G20190 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 10463298-10473297 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495728 5273 Angiosperm View MSA
122331937 5261 Brassicaceae View MSA
123773060 5264 Brassicales-Malvales View MSA
124271563 5266 SBM View MSA
124127536 5268 Malvidae View MSA
123856377 5270 Rosid View MSA
123442308 5271 Pentapetalae View MSA
122477886 5272 Eudicot View MSA
120769090 5274 Embryophyte View MSA
122811468 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain