Gene : AL8G18495 A. lyrata v2.1

Defline:  (1 of 4) PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Genomic Order:  757
Name:  ? AL8G18495 Secondary Identifier:  ? PAC:35948540

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G18495 0.5kb upstream 0.5kb upstream 3016   true scaffold_8: 6010075-6013090 Arabidopsis lyrata
AL8G18495 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 6010075-6010574 Arabidopsis lyrata
AL8G18495 0.5kb downstream 0.5kb downstream 3016   true scaffold_8: 6010575-6013590 Arabidopsis lyrata
AL8G18495 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 6013091-6013590 Arabidopsis lyrata
AL8G18495 1.0kb upstream 1.0kb upstream 3516   true scaffold_8: 6009575-6013090 Arabidopsis lyrata
AL8G18495 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 6009575-6010574 Arabidopsis lyrata
AL8G18495 1.0kb downstream 1.0kb downstream 3516   true scaffold_8: 6010575-6014090 Arabidopsis lyrata
AL8G18495 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 6013091-6014090 Arabidopsis lyrata
AL8G18495 2.0kb upstream 2.0kb upstream 4516   true scaffold_8: 6008575-6013090 Arabidopsis lyrata
AL8G18495 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 6008575-6010574 Arabidopsis lyrata
AL8G18495 2.0kb downstream 2.0kb downstream 4516   true scaffold_8: 6010575-6015090 Arabidopsis lyrata
AL8G18495 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 6013091-6015090 Arabidopsis lyrata
AL8G18495 5.0kb upstream 5.0kb upstream 7516   true scaffold_8: 6005575-6013090 Arabidopsis lyrata
AL8G18495 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 6005575-6010574 Arabidopsis lyrata
AL8G18495 5.0kb downstream 5.0kb downstream 7516   true scaffold_8: 6010575-6018090 Arabidopsis lyrata
AL8G18495 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 6013091-6018090 Arabidopsis lyrata
AL8G18495 10.0kb upstream 10.0kb upstream 12516   true scaffold_8: 6000575-6013090 Arabidopsis lyrata
AL8G18495 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 6000575-6010574 Arabidopsis lyrata
AL8G18495 10.0kb downstream 10.0kb downstream 12516   true scaffold_8: 6010575-6023090 Arabidopsis lyrata
AL8G18495 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 6013091-6023090 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377393 5261 Brassicaceae View MSA
123836440 5264 Brassicales-Malvales View MSA
124343009 5266 SBM View MSA
124239372 5268 Malvidae View MSA
124064535 5270 Rosid View MSA
123751271 5271 Pentapetalae View MSA
122796677 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain