Gene : AL8G16680 A. lyrata v2.1

Defline:  (1 of 1) 3.5.3.19 - Transferred entry: 3.5.1.116 Genomic Order:  602
Name:  ? AL8G16680 Secondary Identifier:  ? PAC:35950499

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5692 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G16680 0.5kb upstream 0.5kb upstream 4855   true scaffold_8: 4173040-4177894 Arabidopsis lyrata
AL8G16680 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 4177395-4177894 Arabidopsis lyrata
AL8G16680 0.5kb downstream 0.5kb downstream 4855   true scaffold_8: 4172540-4177394 Arabidopsis lyrata
AL8G16680 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 4172540-4173039 Arabidopsis lyrata
AL8G16680 1.0kb upstream 1.0kb upstream 5355   true scaffold_8: 4173040-4178394 Arabidopsis lyrata
AL8G16680 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 4177395-4178394 Arabidopsis lyrata
AL8G16680 1.0kb downstream 1.0kb downstream 5355   true scaffold_8: 4172040-4177394 Arabidopsis lyrata
AL8G16680 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 4172040-4173039 Arabidopsis lyrata
AL8G16680 2.0kb upstream 2.0kb upstream 6355   true scaffold_8: 4173040-4179394 Arabidopsis lyrata
AL8G16680 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 4177395-4179394 Arabidopsis lyrata
AL8G16680 2.0kb downstream 2.0kb downstream 6355   true scaffold_8: 4171040-4177394 Arabidopsis lyrata
AL8G16680 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 4171040-4173039 Arabidopsis lyrata
AL8G16680 5.0kb upstream 5.0kb upstream 9355   true scaffold_8: 4173040-4182394 Arabidopsis lyrata
AL8G16680 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 4177395-4182394 Arabidopsis lyrata
AL8G16680 5.0kb downstream 5.0kb downstream 9355   true scaffold_8: 4168040-4177394 Arabidopsis lyrata
AL8G16680 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 4168040-4173039 Arabidopsis lyrata
AL8G16680 10.0kb upstream 10.0kb upstream 14355   true scaffold_8: 4173040-4187394 Arabidopsis lyrata
AL8G16680 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 4177395-4187394 Arabidopsis lyrata
AL8G16680 10.0kb downstream 10.0kb downstream 14355   true scaffold_8: 4163040-4177394 Arabidopsis lyrata
AL8G16680 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 4163040-4173039 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041035 5273 Angiosperm View MSA
122367263 5261 Brassicaceae View MSA
123834719 5264 Brassicales-Malvales View MSA
124338771 5266 SBM View MSA
124237008 5268 Malvidae View MSA
124063156 5270 Rosid View MSA
123740651 5271 Pentapetalae View MSA
122791009 5272 Eudicot View MSA
121347632 5274 Embryophyte View MSA
123424976 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain