Gene : AL8G12640 A. lyrata v2.1

Defline:  (1 of 36) PF07333 - S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) (SLR1-BP) Genomic Order:  245
Name:  ? AL8G12640 Secondary Identifier:  ? PAC:35950445

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G12640 0.5kb upstream 0.5kb upstream 1115   true scaffold_8: 1350143-1351257 Arabidopsis lyrata
AL8G12640 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 1350758-1351257 Arabidopsis lyrata
AL8G12640 0.5kb downstream 0.5kb downstream 1115   true scaffold_8: 1349643-1350757 Arabidopsis lyrata
AL8G12640 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 1349643-1350142 Arabidopsis lyrata
AL8G12640 1.0kb upstream 1.0kb upstream 1615   true scaffold_8: 1350143-1351757 Arabidopsis lyrata
AL8G12640 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 1350758-1351757 Arabidopsis lyrata
AL8G12640 1.0kb downstream 1.0kb downstream 1615   true scaffold_8: 1349143-1350757 Arabidopsis lyrata
AL8G12640 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 1349143-1350142 Arabidopsis lyrata
AL8G12640 2.0kb upstream 2.0kb upstream 2615   true scaffold_8: 1350143-1352757 Arabidopsis lyrata
AL8G12640 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 1350758-1352757 Arabidopsis lyrata
AL8G12640 2.0kb downstream 2.0kb downstream 2615   true scaffold_8: 1348143-1350757 Arabidopsis lyrata
AL8G12640 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 1348143-1350142 Arabidopsis lyrata
AL8G12640 5.0kb upstream 5.0kb upstream 5615   true scaffold_8: 1350143-1355757 Arabidopsis lyrata
AL8G12640 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 1350758-1355757 Arabidopsis lyrata
AL8G12640 5.0kb downstream 5.0kb downstream 5615   true scaffold_8: 1345143-1350757 Arabidopsis lyrata
AL8G12640 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 1345143-1350142 Arabidopsis lyrata
AL8G12640 10.0kb upstream 10.0kb upstream 10615   true scaffold_8: 1350143-1360757 Arabidopsis lyrata
AL8G12640 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 1350758-1360757 Arabidopsis lyrata
AL8G12640 10.0kb downstream 10.0kb downstream 10615   true scaffold_8: 1340143-1350757 Arabidopsis lyrata
AL8G12640 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 1340143-1350142 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792133 5273 Angiosperm View MSA
122380398 5261 Brassicaceae View MSA
123841300 5264 Brassicales-Malvales View MSA
124322889 5266 SBM View MSA
124251397 5268 Malvidae View MSA
124067401 5270 Rosid View MSA
123743891 5271 Pentapetalae View MSA
122796538 5272 Eudicot View MSA
121063384 5274 Embryophyte View MSA
123103137 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain