Gene : AL8G13460 A. lyrata v2.1

Defline:  (1 of 2) PTHR24286:SF10 - ABSCISIC ACID 8'-HYDROXYLASE 1-RELATED Genomic Order:  323
Name:  ? AL8G13460 Secondary Identifier:  ? PAC:35950277

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5271 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G13460 0.5kb upstream 0.5kb upstream 2914   true scaffold_8: 2053907-2056820 Arabidopsis lyrata
AL8G13460 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 2053907-2054406 Arabidopsis lyrata
AL8G13460 0.5kb downstream 0.5kb downstream 2914   true scaffold_8: 2054407-2057320 Arabidopsis lyrata
AL8G13460 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 2056821-2057320 Arabidopsis lyrata
AL8G13460 1.0kb upstream 1.0kb upstream 3414   true scaffold_8: 2053407-2056820 Arabidopsis lyrata
AL8G13460 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 2053407-2054406 Arabidopsis lyrata
AL8G13460 1.0kb downstream 1.0kb downstream 3414   true scaffold_8: 2054407-2057820 Arabidopsis lyrata
AL8G13460 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 2056821-2057820 Arabidopsis lyrata
AL8G13460 2.0kb upstream 2.0kb upstream 4414   true scaffold_8: 2052407-2056820 Arabidopsis lyrata
AL8G13460 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 2052407-2054406 Arabidopsis lyrata
AL8G13460 2.0kb downstream 2.0kb downstream 4414   true scaffold_8: 2054407-2058820 Arabidopsis lyrata
AL8G13460 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 2056821-2058820 Arabidopsis lyrata
AL8G13460 5.0kb upstream 5.0kb upstream 7414   true scaffold_8: 2049407-2056820 Arabidopsis lyrata
AL8G13460 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 2049407-2054406 Arabidopsis lyrata
AL8G13460 5.0kb downstream 5.0kb downstream 7414   true scaffold_8: 2054407-2061820 Arabidopsis lyrata
AL8G13460 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 2056821-2061820 Arabidopsis lyrata
AL8G13460 10.0kb upstream 10.0kb upstream 12414   true scaffold_8: 2044407-2056820 Arabidopsis lyrata
AL8G13460 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 2044407-2054406 Arabidopsis lyrata
AL8G13460 10.0kb downstream 10.0kb downstream 12414   true scaffold_8: 2054407-2066820 Arabidopsis lyrata
AL8G13460 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 2056821-2066820 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379349 5261 Brassicaceae View MSA
123839116 5264 Brassicales-Malvales View MSA
124341154 5266 SBM View MSA
124251238 5268 Malvidae View MSA
124067549 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain