Gene : AL8G36290 A. lyrata v2.1

Defline:  (1 of 2) 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase Genomic Order:  2360
Name:  ? AL8G36290 Secondary Identifier:  ? PAC:35950599

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5080 Arabidopsis lyrata pathologic  
Alyrata PWY-6433 Arabidopsis lyrata pathologic  
Alyrata PWY-6598 Arabidopsis lyrata pathologic  
Alyrata PWY-7036 Arabidopsis lyrata pathologic  
Alyrata PWY-7601 Arabidopsis lyrata pathologic  
Alyrata PWY-7606 Arabidopsis lyrata pathologic  
Alyrata PWY-7619 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G36290 0.5kb upstream 0.5kb upstream 2493   true scaffold_8: 19254055-19256547 Arabidopsis lyrata
AL8G36290 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 19256048-19256547 Arabidopsis lyrata
AL8G36290 0.5kb downstream 0.5kb downstream 2493   true scaffold_8: 19253555-19256047 Arabidopsis lyrata
AL8G36290 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 19253555-19254054 Arabidopsis lyrata
AL8G36290 1.0kb upstream 1.0kb upstream 2993   true scaffold_8: 19254055-19257047 Arabidopsis lyrata
AL8G36290 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 19256048-19257047 Arabidopsis lyrata
AL8G36290 1.0kb downstream 1.0kb downstream 2993   true scaffold_8: 19253055-19256047 Arabidopsis lyrata
AL8G36290 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 19253055-19254054 Arabidopsis lyrata
AL8G36290 2.0kb upstream 2.0kb upstream 3993   true scaffold_8: 19254055-19258047 Arabidopsis lyrata
AL8G36290 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 19256048-19258047 Arabidopsis lyrata
AL8G36290 2.0kb downstream 2.0kb downstream 3993   true scaffold_8: 19252055-19256047 Arabidopsis lyrata
AL8G36290 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 19252055-19254054 Arabidopsis lyrata
AL8G36290 5.0kb upstream 5.0kb upstream 6993   true scaffold_8: 19254055-19261047 Arabidopsis lyrata
AL8G36290 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 19256048-19261047 Arabidopsis lyrata
AL8G36290 5.0kb downstream 5.0kb downstream 6993   true scaffold_8: 19249055-19256047 Arabidopsis lyrata
AL8G36290 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 19249055-19254054 Arabidopsis lyrata
AL8G36290 10.0kb upstream 10.0kb upstream 11993   true scaffold_8: 19254055-19266047 Arabidopsis lyrata
AL8G36290 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 19256048-19266047 Arabidopsis lyrata
AL8G36290 10.0kb downstream 10.0kb downstream 11993   true scaffold_8: 19244055-19256047 Arabidopsis lyrata
AL8G36290 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 19244055-19254054 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367081 5261 Brassicaceae View MSA
123836753 5264 Brassicales-Malvales View MSA
124349665 5266 SBM View MSA
124243174 5268 Malvidae View MSA
124067090 5270 Rosid View MSA
123747996 5271 Pentapetalae View MSA
122792245 5272 Eudicot View MSA
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain