Gene : AL8G31480 A. lyrata v2.1
Defline:  (1 of 2) 2.1.1.178 - 16S rRNA (cytosine(1407)-C(5))-methyltransferase Genomic Order:  1911
Name:  ? AL8G31480 Secondary Identifier:  ? PAC:35949505
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G31480 0.5kb upstream 0.5kb upstream 4375   true scaffold_8: 17221018-17225392 Arabidopsis lyrata
AL8G31480 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 17224893-17225392 Arabidopsis lyrata
AL8G31480 0.5kb downstream 0.5kb downstream 4375   true scaffold_8: 17220518-17224892 Arabidopsis lyrata
AL8G31480 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 17220518-17221017 Arabidopsis lyrata
AL8G31480 1.0kb upstream 1.0kb upstream 4875   true scaffold_8: 17221018-17225892 Arabidopsis lyrata
AL8G31480 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 17224893-17225892 Arabidopsis lyrata
AL8G31480 1.0kb downstream 1.0kb downstream 4875   true scaffold_8: 17220018-17224892 Arabidopsis lyrata
AL8G31480 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 17220018-17221017 Arabidopsis lyrata
AL8G31480 2.0kb upstream 2.0kb upstream 5875   true scaffold_8: 17221018-17226892 Arabidopsis lyrata
AL8G31480 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 17224893-17226892 Arabidopsis lyrata
AL8G31480 2.0kb downstream 2.0kb downstream 5875   true scaffold_8: 17219018-17224892 Arabidopsis lyrata
AL8G31480 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 17219018-17221017 Arabidopsis lyrata
AL8G31480 5.0kb upstream 5.0kb upstream 8875   true scaffold_8: 17221018-17229892 Arabidopsis lyrata
AL8G31480 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 17224893-17229892 Arabidopsis lyrata
AL8G31480 5.0kb downstream 5.0kb downstream 8875   true scaffold_8: 17216018-17224892 Arabidopsis lyrata
AL8G31480 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 17216018-17221017 Arabidopsis lyrata
AL8G31480 10.0kb upstream 10.0kb upstream 13875   true scaffold_8: 17221018-17234892 Arabidopsis lyrata
AL8G31480 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 17224893-17234892 Arabidopsis lyrata
AL8G31480 10.0kb downstream 10.0kb downstream 13875   true scaffold_8: 17211018-17224892 Arabidopsis lyrata
AL8G31480 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 17211018-17221017 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370457 5261 Brassicaceae View MSA
123799968 5264 Brassicales-Malvales View MSA
124297435 5266 SBM View MSA
124250297 5268 Malvidae View MSA
124073549 5270 Rosid View MSA
123740047 5271 Pentapetalae View MSA
122787436 5272 Eudicot View MSA
122043907 5273 Angiosperm View MSA
121346553 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain