Gene : AL8G32550 A. lyrata v2.1

Defline:  (1 of 1) PTHR23382:SF5 - MALATE DEHYDROGENASE Genomic Order:  2012
Name:  ? AL8G32550 Secondary Identifier:  ? PAC:35949629

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUCONEO-PWY Arabidopsis lyrata pathologic  
Alyrata GLYOXYLATE-BYPASS Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY-561 Arabidopsis lyrata pathologic  
Alyrata PWY-5690 Arabidopsis lyrata pathologic  
Alyrata PWY66-399 Arabidopsis lyrata pathologic  
Alyrata PWY-7115 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G32550 0.5kb upstream 0.5kb upstream 1878   true scaffold_8: 17678154-17680031 Arabidopsis lyrata
AL8G32550 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 17678154-17678653 Arabidopsis lyrata
AL8G32550 0.5kb downstream 0.5kb downstream 1878   true scaffold_8: 17678654-17680531 Arabidopsis lyrata
AL8G32550 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 17680032-17680531 Arabidopsis lyrata
AL8G32550 1.0kb upstream 1.0kb upstream 2378   true scaffold_8: 17677654-17680031 Arabidopsis lyrata
AL8G32550 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 17677654-17678653 Arabidopsis lyrata
AL8G32550 1.0kb downstream 1.0kb downstream 2378   true scaffold_8: 17678654-17681031 Arabidopsis lyrata
AL8G32550 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 17680032-17681031 Arabidopsis lyrata
AL8G32550 2.0kb upstream 2.0kb upstream 3378   true scaffold_8: 17676654-17680031 Arabidopsis lyrata
AL8G32550 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 17676654-17678653 Arabidopsis lyrata
AL8G32550 2.0kb downstream 2.0kb downstream 3378   true scaffold_8: 17678654-17682031 Arabidopsis lyrata
AL8G32550 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 17680032-17682031 Arabidopsis lyrata
AL8G32550 5.0kb upstream 5.0kb upstream 6378   true scaffold_8: 17673654-17680031 Arabidopsis lyrata
AL8G32550 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 17673654-17678653 Arabidopsis lyrata
AL8G32550 5.0kb downstream 5.0kb downstream 6378   true scaffold_8: 17678654-17685031 Arabidopsis lyrata
AL8G32550 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 17680032-17685031 Arabidopsis lyrata
AL8G32550 10.0kb upstream 10.0kb upstream 11378   true scaffold_8: 17668654-17680031 Arabidopsis lyrata
AL8G32550 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 17668654-17678653 Arabidopsis lyrata
AL8G32550 10.0kb downstream 10.0kb downstream 11378   true scaffold_8: 17678654-17690031 Arabidopsis lyrata
AL8G32550 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 17680032-17690031 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361174 5261 Brassicaceae View MSA
123830714 5264 Brassicales-Malvales View MSA
124349239 5266 SBM View MSA
124248989 5268 Malvidae View MSA
124071542 5270 Rosid View MSA
123746984 5271 Pentapetalae View MSA
122786587 5272 Eudicot View MSA
122050336 5273 Angiosperm View MSA
121345674 5274 Embryophyte View MSA
123426378 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain