Gene : AL8G30030 A. lyrata v2.1

Defline:  (1 of 10) KOG0114 - Predicted RNA-binding protein (RRM superfamily) Genomic Order:  1772
Name:  ? AL8G30030 Secondary Identifier:  ? PAC:35949041

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G30030 0.5kb upstream 0.5kb upstream 2082   true scaffold_8: 16651582-16653663 Arabidopsis lyrata
AL8G30030 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 16651582-16652081 Arabidopsis lyrata
AL8G30030 0.5kb downstream 0.5kb downstream 2082   true scaffold_8: 16652082-16654163 Arabidopsis lyrata
AL8G30030 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 16653664-16654163 Arabidopsis lyrata
AL8G30030 1.0kb upstream 1.0kb upstream 2582   true scaffold_8: 16651082-16653663 Arabidopsis lyrata
AL8G30030 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 16651082-16652081 Arabidopsis lyrata
AL8G30030 1.0kb downstream 1.0kb downstream 2582   true scaffold_8: 16652082-16654663 Arabidopsis lyrata
AL8G30030 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 16653664-16654663 Arabidopsis lyrata
AL8G30030 2.0kb upstream 2.0kb upstream 3582   true scaffold_8: 16650082-16653663 Arabidopsis lyrata
AL8G30030 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 16650082-16652081 Arabidopsis lyrata
AL8G30030 2.0kb downstream 2.0kb downstream 3582   true scaffold_8: 16652082-16655663 Arabidopsis lyrata
AL8G30030 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 16653664-16655663 Arabidopsis lyrata
AL8G30030 5.0kb upstream 5.0kb upstream 6582   true scaffold_8: 16647082-16653663 Arabidopsis lyrata
AL8G30030 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 16647082-16652081 Arabidopsis lyrata
AL8G30030 5.0kb downstream 5.0kb downstream 6582   true scaffold_8: 16652082-16658663 Arabidopsis lyrata
AL8G30030 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 16653664-16658663 Arabidopsis lyrata
AL8G30030 10.0kb upstream 10.0kb upstream 11582   true scaffold_8: 16642082-16653663 Arabidopsis lyrata
AL8G30030 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 16642082-16652081 Arabidopsis lyrata
AL8G30030 10.0kb downstream 10.0kb downstream 11582   true scaffold_8: 16652082-16663663 Arabidopsis lyrata
AL8G30030 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 16653664-16663663 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367739 5261 Brassicaceae View MSA
123829201 5264 Brassicales-Malvales View MSA
124340231 5266 SBM View MSA
124244201 5268 Malvidae View MSA
124065656 5270 Rosid View MSA
123746310 5271 Pentapetalae View MSA
122791948 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain