Gene : AL8G30740 A. lyrata v2.1

Defline:  (1 of 5) K07936 - GTP-binding nuclear protein Ran (RAN) Genomic Order:  1839
Name:  ? AL8G30740 Secondary Identifier:  ? PAC:35948752

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ILEUDEG-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-5136 Arabidopsis lyrata pathologic  
Alyrata PWY-5138 Arabidopsis lyrata pathologic  
Alyrata PWY-561 Arabidopsis lyrata pathologic  
Alyrata PWY-6435 Arabidopsis lyrata pathologic  
Alyrata PWY-7036 Arabidopsis lyrata pathologic  
Alyrata PWY-735 Arabidopsis lyrata pathologic  
Alyrata PWY-7606 Arabidopsis lyrata pathologic  
Alyrata VALDEG-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G30740 0.5kb upstream 0.5kb upstream 2577   true scaffold_8: 16952370-16954946 Arabidopsis lyrata
AL8G30740 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 16952370-16952869 Arabidopsis lyrata
AL8G30740 0.5kb downstream 0.5kb downstream 2577   true scaffold_8: 16952870-16955446 Arabidopsis lyrata
AL8G30740 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 16954947-16955446 Arabidopsis lyrata
AL8G30740 1.0kb upstream 1.0kb upstream 3077   true scaffold_8: 16951870-16954946 Arabidopsis lyrata
AL8G30740 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 16951870-16952869 Arabidopsis lyrata
AL8G30740 1.0kb downstream 1.0kb downstream 3077   true scaffold_8: 16952870-16955946 Arabidopsis lyrata
AL8G30740 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 16954947-16955946 Arabidopsis lyrata
AL8G30740 2.0kb upstream 2.0kb upstream 4077   true scaffold_8: 16950870-16954946 Arabidopsis lyrata
AL8G30740 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 16950870-16952869 Arabidopsis lyrata
AL8G30740 2.0kb downstream 2.0kb downstream 4077   true scaffold_8: 16952870-16956946 Arabidopsis lyrata
AL8G30740 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 16954947-16956946 Arabidopsis lyrata
AL8G30740 5.0kb upstream 5.0kb upstream 7077   true scaffold_8: 16947870-16954946 Arabidopsis lyrata
AL8G30740 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 16947870-16952869 Arabidopsis lyrata
AL8G30740 5.0kb downstream 5.0kb downstream 7077   true scaffold_8: 16952870-16959946 Arabidopsis lyrata
AL8G30740 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 16954947-16959946 Arabidopsis lyrata
AL8G30740 10.0kb upstream 10.0kb upstream 12077   true scaffold_8: 16942870-16954946 Arabidopsis lyrata
AL8G30740 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 16942870-16952869 Arabidopsis lyrata
AL8G30740 10.0kb downstream 10.0kb downstream 12077   true scaffold_8: 16952870-16964946 Arabidopsis lyrata
AL8G30740 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 16954947-16964946 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371036 5261 Brassicaceae View MSA
123829338 5264 Brassicales-Malvales View MSA
124347070 5266 SBM View MSA
124237166 5268 Malvidae View MSA
124073929 5270 Rosid View MSA
123749309 5271 Pentapetalae View MSA
122790069 5272 Eudicot View MSA
122051651 5273 Angiosperm View MSA
121349425 5274 Embryophyte View MSA
123424763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain