Gene : AL8G28160 A. lyrata v2.1

Defline:  (1 of 1) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  1598
Name:  ? AL8G28160 Secondary Identifier:  ? PAC:35948164

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUGLNSYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-3282 Arabidopsis lyrata pathologic  
Alyrata PWY-6963 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G28160 0.5kb upstream 0.5kb upstream 10245   true scaffold_8: 15758531-15768775 Arabidopsis lyrata
AL8G28160 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 15758531-15759030 Arabidopsis lyrata
AL8G28160 0.5kb downstream 0.5kb downstream 10245   true scaffold_8: 15759031-15769275 Arabidopsis lyrata
AL8G28160 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 15768776-15769275 Arabidopsis lyrata
AL8G28160 1.0kb upstream 1.0kb upstream 10745   true scaffold_8: 15758031-15768775 Arabidopsis lyrata
AL8G28160 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 15758031-15759030 Arabidopsis lyrata
AL8G28160 1.0kb downstream 1.0kb downstream 10745   true scaffold_8: 15759031-15769775 Arabidopsis lyrata
AL8G28160 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 15768776-15769775 Arabidopsis lyrata
AL8G28160 2.0kb upstream 2.0kb upstream 11745   true scaffold_8: 15757031-15768775 Arabidopsis lyrata
AL8G28160 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 15757031-15759030 Arabidopsis lyrata
AL8G28160 2.0kb downstream 2.0kb downstream 11745   true scaffold_8: 15759031-15770775 Arabidopsis lyrata
AL8G28160 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 15768776-15770775 Arabidopsis lyrata
AL8G28160 5.0kb upstream 5.0kb upstream 14745   true scaffold_8: 15754031-15768775 Arabidopsis lyrata
AL8G28160 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 15754031-15759030 Arabidopsis lyrata
AL8G28160 5.0kb downstream 5.0kb downstream 14745   true scaffold_8: 15759031-15773775 Arabidopsis lyrata
AL8G28160 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 15768776-15773775 Arabidopsis lyrata
AL8G28160 10.0kb upstream 10.0kb upstream 19745   true scaffold_8: 15749031-15768775 Arabidopsis lyrata
AL8G28160 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 15749031-15759030 Arabidopsis lyrata
AL8G28160 10.0kb downstream 10.0kb downstream 19745   true scaffold_8: 15759031-15778775 Arabidopsis lyrata
AL8G28160 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 15768776-15778775 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366728 5261 Brassicaceae View MSA
123832225 5264 Brassicales-Malvales View MSA
124341222 5266 SBM View MSA
124241008 5268 Malvidae View MSA
124067049 5270 Rosid View MSA
123737951 5271 Pentapetalae View MSA
122793648 5272 Eudicot View MSA
122047244 5273 Angiosperm View MSA
121349673 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain