Gene : AL8G27050 A. lyrata v2.1

Defline:  (1 of 2) 1.14.13.129 - Beta-carotene 3-hydroxylase / Beta-carotene 3,3'-monooxygenase Genomic Order:  1491
Name:  ? AL8G27050 Secondary Identifier:  ? PAC:35948050

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata CAROTENOID-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-5944 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G27050 0.5kb upstream 0.5kb upstream 2610   true scaffold_8: 15215924-15218533 Arabidopsis lyrata
AL8G27050 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 15218034-15218533 Arabidopsis lyrata
AL8G27050 0.5kb downstream 0.5kb downstream 2610   true scaffold_8: 15215424-15218033 Arabidopsis lyrata
AL8G27050 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 15215424-15215923 Arabidopsis lyrata
AL8G27050 1.0kb upstream 1.0kb upstream 3110   true scaffold_8: 15215924-15219033 Arabidopsis lyrata
AL8G27050 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 15218034-15219033 Arabidopsis lyrata
AL8G27050 1.0kb downstream 1.0kb downstream 3110   true scaffold_8: 15214924-15218033 Arabidopsis lyrata
AL8G27050 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 15214924-15215923 Arabidopsis lyrata
AL8G27050 2.0kb upstream 2.0kb upstream 4110   true scaffold_8: 15215924-15220033 Arabidopsis lyrata
AL8G27050 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 15218034-15220033 Arabidopsis lyrata
AL8G27050 2.0kb downstream 2.0kb downstream 4110   true scaffold_8: 15213924-15218033 Arabidopsis lyrata
AL8G27050 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 15213924-15215923 Arabidopsis lyrata
AL8G27050 5.0kb upstream 5.0kb upstream 7110   true scaffold_8: 15215924-15223033 Arabidopsis lyrata
AL8G27050 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 15218034-15223033 Arabidopsis lyrata
AL8G27050 5.0kb downstream 5.0kb downstream 7110   true scaffold_8: 15210924-15218033 Arabidopsis lyrata
AL8G27050 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 15210924-15215923 Arabidopsis lyrata
AL8G27050 10.0kb upstream 10.0kb upstream 12110   true scaffold_8: 15215924-15228033 Arabidopsis lyrata
AL8G27050 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 15218034-15228033 Arabidopsis lyrata
AL8G27050 10.0kb downstream 10.0kb downstream 12110   true scaffold_8: 15205924-15218033 Arabidopsis lyrata
AL8G27050 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 15205924-15215923 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360367 5261 Brassicaceae View MSA
123837541 5264 Brassicales-Malvales View MSA
124338230 5266 SBM View MSA
124251518 5268 Malvidae View MSA
124066838 5270 Rosid View MSA
123749049 5271 Pentapetalae View MSA
122787521 5272 Eudicot View MSA
122046641 5273 Angiosperm View MSA
123429104 5275 Viridiplantae View MSA
121351007 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain