Gene : AL8G27280 A. lyrata v2.1

Defline:  (1 of 1) K03949 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5 (NDUFA5) Genomic Order:  1513
Name:  ? AL8G27280 Secondary Identifier:  ? PAC:35950334

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3781 Arabidopsis lyrata pathologic  
Alyrata PWY-4302 Arabidopsis lyrata pathologic  
Alyrata PWY-5083 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G27280 0.5kb upstream 0.5kb upstream 1855   true scaffold_8: 15299711-15301565 Arabidopsis lyrata
AL8G27280 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 15299711-15300210 Arabidopsis lyrata
AL8G27280 0.5kb downstream 0.5kb downstream 1855   true scaffold_8: 15300211-15302065 Arabidopsis lyrata
AL8G27280 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 15301566-15302065 Arabidopsis lyrata
AL8G27280 1.0kb upstream 1.0kb upstream 2355   true scaffold_8: 15299211-15301565 Arabidopsis lyrata
AL8G27280 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 15299211-15300210 Arabidopsis lyrata
AL8G27280 1.0kb downstream 1.0kb downstream 2355   true scaffold_8: 15300211-15302565 Arabidopsis lyrata
AL8G27280 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 15301566-15302565 Arabidopsis lyrata
AL8G27280 2.0kb upstream 2.0kb upstream 3355   true scaffold_8: 15298211-15301565 Arabidopsis lyrata
AL8G27280 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 15298211-15300210 Arabidopsis lyrata
AL8G27280 2.0kb downstream 2.0kb downstream 3355   true scaffold_8: 15300211-15303565 Arabidopsis lyrata
AL8G27280 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 15301566-15303565 Arabidopsis lyrata
AL8G27280 5.0kb upstream 5.0kb upstream 6355   true scaffold_8: 15295211-15301565 Arabidopsis lyrata
AL8G27280 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 15295211-15300210 Arabidopsis lyrata
AL8G27280 5.0kb downstream 5.0kb downstream 6355   true scaffold_8: 15300211-15306565 Arabidopsis lyrata
AL8G27280 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 15301566-15306565 Arabidopsis lyrata
AL8G27280 10.0kb upstream 10.0kb upstream 11355   true scaffold_8: 15290211-15301565 Arabidopsis lyrata
AL8G27280 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 15290211-15300210 Arabidopsis lyrata
AL8G27280 10.0kb downstream 10.0kb downstream 11355   true scaffold_8: 15300211-15311565 Arabidopsis lyrata
AL8G27280 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 15301566-15311565 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378608 5261 Brassicaceae View MSA
123838702 5264 Brassicales-Malvales View MSA
124341816 5266 SBM View MSA
124240898 5268 Malvidae View MSA
124062156 5270 Rosid View MSA
123746684 5271 Pentapetalae View MSA
122793843 5272 Eudicot View MSA
122046813 5273 Angiosperm View MSA
121348614 5274 Embryophyte View MSA
123425136 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain