Gene : AL8G26830 A. lyrata v2.1

Defline:  (1 of 2) PF00395 - S-layer homology domain (SLH) Genomic Order:  1471
Name:  ? AL8G26830 Secondary Identifier:  ? PAC:35949638

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G26830 0.5kb upstream 0.5kb upstream 4299   true scaffold_8: 15117288-15121586 Arabidopsis lyrata
AL8G26830 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 15117288-15117787 Arabidopsis lyrata
AL8G26830 0.5kb downstream 0.5kb downstream 4299   true scaffold_8: 15117788-15122086 Arabidopsis lyrata
AL8G26830 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 15121587-15122086 Arabidopsis lyrata
AL8G26830 1.0kb upstream 1.0kb upstream 4799   true scaffold_8: 15116788-15121586 Arabidopsis lyrata
AL8G26830 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 15116788-15117787 Arabidopsis lyrata
AL8G26830 1.0kb downstream 1.0kb downstream 4799   true scaffold_8: 15117788-15122586 Arabidopsis lyrata
AL8G26830 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 15121587-15122586 Arabidopsis lyrata
AL8G26830 2.0kb upstream 2.0kb upstream 5799   true scaffold_8: 15115788-15121586 Arabidopsis lyrata
AL8G26830 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 15115788-15117787 Arabidopsis lyrata
AL8G26830 2.0kb downstream 2.0kb downstream 5799   true scaffold_8: 15117788-15123586 Arabidopsis lyrata
AL8G26830 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 15121587-15123586 Arabidopsis lyrata
AL8G26830 5.0kb upstream 5.0kb upstream 8799   true scaffold_8: 15112788-15121586 Arabidopsis lyrata
AL8G26830 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 15112788-15117787 Arabidopsis lyrata
AL8G26830 5.0kb downstream 5.0kb downstream 8799   true scaffold_8: 15117788-15126586 Arabidopsis lyrata
AL8G26830 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 15121587-15126586 Arabidopsis lyrata
AL8G26830 10.0kb upstream 10.0kb upstream 13799   true scaffold_8: 15107788-15121586 Arabidopsis lyrata
AL8G26830 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 15107788-15117787 Arabidopsis lyrata
AL8G26830 10.0kb downstream 10.0kb downstream 13799   true scaffold_8: 15117788-15131586 Arabidopsis lyrata
AL8G26830 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 15121587-15131586 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367630 5261 Brassicaceae View MSA
123799404 5264 Brassicales-Malvales View MSA
124296928 5266 SBM View MSA
124148952 5268 Malvidae View MSA
123874852 5270 Rosid View MSA
123746711 5271 Pentapetalae View MSA
122791247 5272 Eudicot View MSA
122044755 5273 Angiosperm View MSA
121350545 5274 Embryophyte View MSA
123381784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain