Gene : AL8G27580 A. lyrata v2.1
Defline:  (1 of 3) PTHR31394:SF1 - TRANSMEMBRANE PROTEIN 199 Genomic Order:  1543
Name:  ? AL8G27580 Secondary Identifier:  ? PAC:35948279
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G27580 0.5kb upstream 0.5kb upstream 2042   true scaffold_8: 15421415-15423456 Arabidopsis lyrata
AL8G27580 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 15422957-15423456 Arabidopsis lyrata
AL8G27580 0.5kb downstream 0.5kb downstream 2042   true scaffold_8: 15420915-15422956 Arabidopsis lyrata
AL8G27580 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 15420915-15421414 Arabidopsis lyrata
AL8G27580 1.0kb upstream 1.0kb upstream 2542   true scaffold_8: 15421415-15423956 Arabidopsis lyrata
AL8G27580 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 15422957-15423956 Arabidopsis lyrata
AL8G27580 1.0kb downstream 1.0kb downstream 2542   true scaffold_8: 15420415-15422956 Arabidopsis lyrata
AL8G27580 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 15420415-15421414 Arabidopsis lyrata
AL8G27580 2.0kb upstream 2.0kb upstream 3542   true scaffold_8: 15421415-15424956 Arabidopsis lyrata
AL8G27580 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 15422957-15424956 Arabidopsis lyrata
AL8G27580 2.0kb downstream 2.0kb downstream 3542   true scaffold_8: 15419415-15422956 Arabidopsis lyrata
AL8G27580 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 15419415-15421414 Arabidopsis lyrata
AL8G27580 5.0kb upstream 5.0kb upstream 6542   true scaffold_8: 15421415-15427956 Arabidopsis lyrata
AL8G27580 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 15422957-15427956 Arabidopsis lyrata
AL8G27580 5.0kb downstream 5.0kb downstream 6542   true scaffold_8: 15416415-15422956 Arabidopsis lyrata
AL8G27580 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 15416415-15421414 Arabidopsis lyrata
AL8G27580 10.0kb upstream 10.0kb upstream 11542   true scaffold_8: 15421415-15432956 Arabidopsis lyrata
AL8G27580 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 15422957-15432956 Arabidopsis lyrata
AL8G27580 10.0kb downstream 10.0kb downstream 11542   true scaffold_8: 15411415-15422956 Arabidopsis lyrata
AL8G27580 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 15411415-15421414 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122326591 5261 Brassicaceae Singleton cluster - no MSA
123835410 5264 Brassicales-Malvales View MSA
124340355 5266 SBM View MSA
124239515 5268 Malvidae View MSA
124060420 5270 Rosid View MSA
123736376 5271 Pentapetalae View MSA
122786410 5272 Eudicot View MSA
122047904 5273 Angiosperm View MSA
121346393 5274 Embryophyte View MSA
123426086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain