Gene : AL8G25560 A. lyrata v2.1

Defline:  (1 of 1) K04715 - ceramide kinase (E2.7.1.138, CERK) Genomic Order:  1354
Name:  ? AL8G25560 Secondary Identifier:  ? PAC:35949730

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5129 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G25560 0.5kb upstream 0.5kb upstream 4776   true scaffold_8: 14435382-14440157 Arabidopsis lyrata
AL8G25560 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 14439658-14440157 Arabidopsis lyrata
AL8G25560 0.5kb downstream 0.5kb downstream 4776   true scaffold_8: 14434882-14439657 Arabidopsis lyrata
AL8G25560 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 14434882-14435381 Arabidopsis lyrata
AL8G25560 1.0kb upstream 1.0kb upstream 5276   true scaffold_8: 14435382-14440657 Arabidopsis lyrata
AL8G25560 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 14439658-14440657 Arabidopsis lyrata
AL8G25560 1.0kb downstream 1.0kb downstream 5276   true scaffold_8: 14434382-14439657 Arabidopsis lyrata
AL8G25560 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 14434382-14435381 Arabidopsis lyrata
AL8G25560 2.0kb upstream 2.0kb upstream 6276   true scaffold_8: 14435382-14441657 Arabidopsis lyrata
AL8G25560 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 14439658-14441657 Arabidopsis lyrata
AL8G25560 2.0kb downstream 2.0kb downstream 6276   true scaffold_8: 14433382-14439657 Arabidopsis lyrata
AL8G25560 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 14433382-14435381 Arabidopsis lyrata
AL8G25560 5.0kb upstream 5.0kb upstream 9276   true scaffold_8: 14435382-14444657 Arabidopsis lyrata
AL8G25560 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 14439658-14444657 Arabidopsis lyrata
AL8G25560 5.0kb downstream 5.0kb downstream 9276   true scaffold_8: 14430382-14439657 Arabidopsis lyrata
AL8G25560 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 14430382-14435381 Arabidopsis lyrata
AL8G25560 10.0kb upstream 10.0kb upstream 14276   true scaffold_8: 14435382-14449657 Arabidopsis lyrata
AL8G25560 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 14439658-14449657 Arabidopsis lyrata
AL8G25560 10.0kb downstream 10.0kb downstream 14276   true scaffold_8: 14425382-14439657 Arabidopsis lyrata
AL8G25560 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 14425382-14435381 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365978 5261 Brassicaceae View MSA
123830936 5264 Brassicales-Malvales View MSA
124346384 5266 SBM View MSA
124251685 5268 Malvidae View MSA
124066629 5270 Rosid View MSA
123746434 5271 Pentapetalae View MSA
122791324 5272 Eudicot View MSA
122045057 5273 Angiosperm View MSA
121345163 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain