Gene : AL8G25820 A. lyrata v2.1

Defline:  (1 of 5) PTHR31080:SF2 - F23N19.14-RELATED Genomic Order:  1378
Name:  ? AL8G25820 Secondary Identifier:  ? PAC:35951152

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G25820 0.5kb upstream 0.5kb upstream 1273   true scaffold_8: 14579437-14580709 Arabidopsis lyrata
AL8G25820 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 14579437-14579936 Arabidopsis lyrata
AL8G25820 0.5kb downstream 0.5kb downstream 1273   true scaffold_8: 14579937-14581209 Arabidopsis lyrata
AL8G25820 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 14580710-14581209 Arabidopsis lyrata
AL8G25820 1.0kb upstream 1.0kb upstream 1773   true scaffold_8: 14578937-14580709 Arabidopsis lyrata
AL8G25820 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 14578937-14579936 Arabidopsis lyrata
AL8G25820 1.0kb downstream 1.0kb downstream 1773   true scaffold_8: 14579937-14581709 Arabidopsis lyrata
AL8G25820 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 14580710-14581709 Arabidopsis lyrata
AL8G25820 2.0kb upstream 2.0kb upstream 2773   true scaffold_8: 14577937-14580709 Arabidopsis lyrata
AL8G25820 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 14577937-14579936 Arabidopsis lyrata
AL8G25820 2.0kb downstream 2.0kb downstream 2773   true scaffold_8: 14579937-14582709 Arabidopsis lyrata
AL8G25820 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 14580710-14582709 Arabidopsis lyrata
AL8G25820 5.0kb upstream 5.0kb upstream 5773   true scaffold_8: 14574937-14580709 Arabidopsis lyrata
AL8G25820 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 14574937-14579936 Arabidopsis lyrata
AL8G25820 5.0kb downstream 5.0kb downstream 5773   true scaffold_8: 14579937-14585709 Arabidopsis lyrata
AL8G25820 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 14580710-14585709 Arabidopsis lyrata
AL8G25820 10.0kb upstream 10.0kb upstream 10773   true scaffold_8: 14569937-14580709 Arabidopsis lyrata
AL8G25820 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 14569937-14579936 Arabidopsis lyrata
AL8G25820 10.0kb downstream 10.0kb downstream 10773   true scaffold_8: 14579937-14590709 Arabidopsis lyrata
AL8G25820 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 14580710-14590709 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370739 5261 Brassicaceae View MSA
123837730 5264 Brassicales-Malvales View MSA
124338445 5266 SBM View MSA
124251328 5268 Malvidae View MSA
124069066 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain