Gene : AL8G26470 A. lyrata v2.1

Defline:  (1 of 1) K16908 - chloroplast NAD(P)H dehydrogenase (CRR1) Genomic Order:  1438
Name:  ? AL8G26470 Secondary Identifier:  ? PAC:35949853

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5097 Arabidopsis lyrata pathologic  
Alyrata PWY-724 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G26470 0.5kb upstream 0.5kb upstream 2721   true scaffold_8: 14967207-14969927 Arabidopsis lyrata
AL8G26470 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 14967207-14967706 Arabidopsis lyrata
AL8G26470 0.5kb downstream 0.5kb downstream 2721   true scaffold_8: 14967707-14970427 Arabidopsis lyrata
AL8G26470 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 14969928-14970427 Arabidopsis lyrata
AL8G26470 1.0kb upstream 1.0kb upstream 3221   true scaffold_8: 14966707-14969927 Arabidopsis lyrata
AL8G26470 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 14966707-14967706 Arabidopsis lyrata
AL8G26470 1.0kb downstream 1.0kb downstream 3221   true scaffold_8: 14967707-14970927 Arabidopsis lyrata
AL8G26470 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 14969928-14970927 Arabidopsis lyrata
AL8G26470 2.0kb upstream 2.0kb upstream 4221   true scaffold_8: 14965707-14969927 Arabidopsis lyrata
AL8G26470 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 14965707-14967706 Arabidopsis lyrata
AL8G26470 2.0kb downstream 2.0kb downstream 4221   true scaffold_8: 14967707-14971927 Arabidopsis lyrata
AL8G26470 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 14969928-14971927 Arabidopsis lyrata
AL8G26470 5.0kb upstream 5.0kb upstream 7221   true scaffold_8: 14962707-14969927 Arabidopsis lyrata
AL8G26470 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 14962707-14967706 Arabidopsis lyrata
AL8G26470 5.0kb downstream 5.0kb downstream 7221   true scaffold_8: 14967707-14974927 Arabidopsis lyrata
AL8G26470 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 14969928-14974927 Arabidopsis lyrata
AL8G26470 10.0kb upstream 10.0kb upstream 12221   true scaffold_8: 14957707-14969927 Arabidopsis lyrata
AL8G26470 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 14957707-14967706 Arabidopsis lyrata
AL8G26470 10.0kb downstream 10.0kb downstream 12221   true scaffold_8: 14967707-14979927 Arabidopsis lyrata
AL8G26470 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 14969928-14979927 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369793 5261 Brassicaceae View MSA
123835004 5264 Brassicales-Malvales View MSA
124342546 5266 SBM View MSA
124237617 5268 Malvidae View MSA
124065069 5270 Rosid View MSA
123739710 5271 Pentapetalae View MSA
122786759 5272 Eudicot View MSA
122042958 5273 Angiosperm View MSA
121344567 5274 Embryophyte View MSA
123380066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain