Gene : AL8G25940 A. lyrata v2.1

Defline:  (1 of 3) K14270 - aminotransferase (ACS10_12) Genomic Order:  1389
Name:  ? AL8G25940 Secondary Identifier:  ? PAC:35949910

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ASPARTATE-DEG1-PWY Arabidopsis lyrata pathologic  
Alyrata ASPARTATESYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-3001 Arabidopsis lyrata pathologic  
Alyrata PWY-7115 Arabidopsis lyrata pathologic  
Alyrata PWY-7117 Arabidopsis lyrata pathologic  
Alyrata THRESYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G25940 0.5kb upstream 0.5kb upstream 2621   true scaffold_8: 14657832-14660452 Arabidopsis lyrata
AL8G25940 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 14659953-14660452 Arabidopsis lyrata
AL8G25940 0.5kb downstream 0.5kb downstream 2621   true scaffold_8: 14657332-14659952 Arabidopsis lyrata
AL8G25940 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 14657332-14657831 Arabidopsis lyrata
AL8G25940 1.0kb upstream 1.0kb upstream 3121   true scaffold_8: 14657832-14660952 Arabidopsis lyrata
AL8G25940 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 14659953-14660952 Arabidopsis lyrata
AL8G25940 1.0kb downstream 1.0kb downstream 3121   true scaffold_8: 14656832-14659952 Arabidopsis lyrata
AL8G25940 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 14656832-14657831 Arabidopsis lyrata
AL8G25940 2.0kb upstream 2.0kb upstream 4121   true scaffold_8: 14657832-14661952 Arabidopsis lyrata
AL8G25940 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 14659953-14661952 Arabidopsis lyrata
AL8G25940 2.0kb downstream 2.0kb downstream 4121   true scaffold_8: 14655832-14659952 Arabidopsis lyrata
AL8G25940 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 14655832-14657831 Arabidopsis lyrata
AL8G25940 5.0kb upstream 5.0kb upstream 7121   true scaffold_8: 14657832-14664952 Arabidopsis lyrata
AL8G25940 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 14659953-14664952 Arabidopsis lyrata
AL8G25940 5.0kb downstream 5.0kb downstream 7121   true scaffold_8: 14652832-14659952 Arabidopsis lyrata
AL8G25940 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 14652832-14657831 Arabidopsis lyrata
AL8G25940 10.0kb upstream 10.0kb upstream 12121   true scaffold_8: 14657832-14669952 Arabidopsis lyrata
AL8G25940 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 14659953-14669952 Arabidopsis lyrata
AL8G25940 10.0kb downstream 10.0kb downstream 12121   true scaffold_8: 14647832-14659952 Arabidopsis lyrata
AL8G25940 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 14647832-14657831 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366530 5261 Brassicaceae View MSA
123829880 5264 Brassicales-Malvales View MSA
124338348 5266 SBM View MSA
124236986 5268 Malvidae View MSA
124060973 5270 Rosid View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain