Gene : AL9U11420 A. lyrata v2.1

Defline:  (1 of 2) PTHR23130:SF95 - AUXIN-RESPONSIVE PROTEIN-RELATED Genomic Order:  113
Name:  ? AL9U11420 Secondary Identifier:  ? PAC:35925596

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL9U11420 0.5kb upstream 0.5kb upstream 2455   true scaffold_9: 1248793-1251247 Arabidopsis lyrata
AL9U11420 0.5kb upstream 0.5kb upstream 500   false scaffold_9: 1248793-1249292 Arabidopsis lyrata
AL9U11420 0.5kb downstream 0.5kb downstream 2455   true scaffold_9: 1249293-1251747 Arabidopsis lyrata
AL9U11420 0.5kb downstream 0.5kb downstream 500   false scaffold_9: 1251248-1251747 Arabidopsis lyrata
AL9U11420 1.0kb upstream 1.0kb upstream 2955   true scaffold_9: 1248293-1251247 Arabidopsis lyrata
AL9U11420 1.0kb upstream 1.0kb upstream 1000   false scaffold_9: 1248293-1249292 Arabidopsis lyrata
AL9U11420 1.0kb downstream 1.0kb downstream 2955   true scaffold_9: 1249293-1252247 Arabidopsis lyrata
AL9U11420 1.0kb downstream 1.0kb downstream 1000   false scaffold_9: 1251248-1252247 Arabidopsis lyrata
AL9U11420 2.0kb upstream 2.0kb upstream 3955   true scaffold_9: 1247293-1251247 Arabidopsis lyrata
AL9U11420 2.0kb upstream 2.0kb upstream 2000   false scaffold_9: 1247293-1249292 Arabidopsis lyrata
AL9U11420 2.0kb downstream 2.0kb downstream 3955   true scaffold_9: 1249293-1253247 Arabidopsis lyrata
AL9U11420 2.0kb downstream 2.0kb downstream 2000   false scaffold_9: 1251248-1253247 Arabidopsis lyrata
AL9U11420 5.0kb upstream 5.0kb upstream 6955   true scaffold_9: 1244293-1251247 Arabidopsis lyrata
AL9U11420 5.0kb upstream 5.0kb upstream 5000   false scaffold_9: 1244293-1249292 Arabidopsis lyrata
AL9U11420 5.0kb downstream 5.0kb downstream 6955   true scaffold_9: 1249293-1256247 Arabidopsis lyrata
AL9U11420 5.0kb downstream 5.0kb downstream 5000   false scaffold_9: 1251248-1256247 Arabidopsis lyrata
AL9U11420 10.0kb upstream 10.0kb upstream 11955   true scaffold_9: 1239293-1251247 Arabidopsis lyrata
AL9U11420 10.0kb upstream 10.0kb upstream 10000   false scaffold_9: 1239293-1249292 Arabidopsis lyrata
AL9U11420 10.0kb downstream 10.0kb downstream 11955   true scaffold_9: 1249293-1261247 Arabidopsis lyrata
AL9U11420 10.0kb downstream 10.0kb downstream 10000   false scaffold_9: 1251248-1261247 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364734 5261 Brassicaceae View MSA
123838754 5264 Brassicales-Malvales View MSA
124336764 5266 SBM View MSA
124253692 5268 Malvidae View MSA
124072358 5270 Rosid View MSA
123745373 5271 Pentapetalae View MSA
122787845 5272 Eudicot View MSA
122050744 5273 Angiosperm View MSA
121348347 5274 Embryophyte View MSA
123428624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain