Gene : AL9U12200 A. lyrata v2.1

Defline:  (1 of 11) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  171
Name:  ? AL9U12200 Secondary Identifier:  ? PAC:35925509

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL9U12200 0.5kb upstream 0.5kb upstream 2158   true scaffold_9: 1791130-1793287 Arabidopsis lyrata
AL9U12200 0.5kb upstream 0.5kb upstream 500   false scaffold_9: 1791130-1791629 Arabidopsis lyrata
AL9U12200 0.5kb downstream 0.5kb downstream 2158   true scaffold_9: 1791630-1793787 Arabidopsis lyrata
AL9U12200 0.5kb downstream 0.5kb downstream 500   false scaffold_9: 1793288-1793787 Arabidopsis lyrata
AL9U12200 1.0kb upstream 1.0kb upstream 2658   true scaffold_9: 1790630-1793287 Arabidopsis lyrata
AL9U12200 1.0kb upstream 1.0kb upstream 1000   false scaffold_9: 1790630-1791629 Arabidopsis lyrata
AL9U12200 1.0kb downstream 1.0kb downstream 2658   true scaffold_9: 1791630-1794287 Arabidopsis lyrata
AL9U12200 1.0kb downstream 1.0kb downstream 1000   false scaffold_9: 1793288-1794287 Arabidopsis lyrata
AL9U12200 2.0kb upstream 2.0kb upstream 3658   true scaffold_9: 1789630-1793287 Arabidopsis lyrata
AL9U12200 2.0kb upstream 2.0kb upstream 2000   false scaffold_9: 1789630-1791629 Arabidopsis lyrata
AL9U12200 2.0kb downstream 2.0kb downstream 3658   true scaffold_9: 1791630-1795287 Arabidopsis lyrata
AL9U12200 2.0kb downstream 2.0kb downstream 2000   false scaffold_9: 1793288-1795287 Arabidopsis lyrata
AL9U12200 5.0kb upstream 5.0kb upstream 6658   true scaffold_9: 1786630-1793287 Arabidopsis lyrata
AL9U12200 5.0kb upstream 5.0kb upstream 5000   false scaffold_9: 1786630-1791629 Arabidopsis lyrata
AL9U12200 5.0kb downstream 5.0kb downstream 6658   true scaffold_9: 1791630-1798287 Arabidopsis lyrata
AL9U12200 5.0kb downstream 5.0kb downstream 5000   false scaffold_9: 1793288-1798287 Arabidopsis lyrata
AL9U12200 10.0kb upstream 10.0kb upstream 11658   true scaffold_9: 1781630-1793287 Arabidopsis lyrata
AL9U12200 10.0kb upstream 10.0kb upstream 10000   false scaffold_9: 1781630-1791629 Arabidopsis lyrata
AL9U12200 10.0kb downstream 10.0kb downstream 11658   true scaffold_9: 1791630-1803287 Arabidopsis lyrata
AL9U12200 10.0kb downstream 10.0kb downstream 10000   false scaffold_9: 1793288-1803287 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343343 5261 Brassicaceae View MSA
123783576 5264 Brassicales-Malvales View MSA
124281800 5266 SBM View MSA
124247851 5268 Malvidae View MSA
124067347 5270 Rosid View MSA
123746466 5271 Pentapetalae View MSA
122797152 5272 Eudicot View MSA
122048974 5273 Angiosperm View MSA
121311194 5274 Embryophyte View MSA
123348523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain