Gene : AL8G45350 A. lyrata v2.1

Defline:  (1 of 1) 2.1.1.202 - Multisite-specific tRNA:(cytosine-C(5))-methyltransferase Genomic Order:  3213
Name:  ? AL8G45350 Secondary Identifier:  ? PAC:35949456

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6829 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G45350 0.5kb upstream 0.5kb upstream 2843   true scaffold_8: 22842794-22845636 Arabidopsis lyrata
AL8G45350 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 22845137-22845636 Arabidopsis lyrata
AL8G45350 0.5kb downstream 0.5kb downstream 2843   true scaffold_8: 22842294-22845136 Arabidopsis lyrata
AL8G45350 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 22842294-22842793 Arabidopsis lyrata
AL8G45350 1.0kb upstream 1.0kb upstream 3343   true scaffold_8: 22842794-22846136 Arabidopsis lyrata
AL8G45350 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 22845137-22846136 Arabidopsis lyrata
AL8G45350 1.0kb downstream 1.0kb downstream 3343   true scaffold_8: 22841794-22845136 Arabidopsis lyrata
AL8G45350 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 22841794-22842793 Arabidopsis lyrata
AL8G45350 2.0kb upstream 2.0kb upstream 4343   true scaffold_8: 22842794-22847136 Arabidopsis lyrata
AL8G45350 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 22845137-22847136 Arabidopsis lyrata
AL8G45350 2.0kb downstream 2.0kb downstream 4343   true scaffold_8: 22840794-22845136 Arabidopsis lyrata
AL8G45350 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 22840794-22842793 Arabidopsis lyrata
AL8G45350 5.0kb upstream 5.0kb upstream 7343   true scaffold_8: 22842794-22850136 Arabidopsis lyrata
AL8G45350 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 22845137-22850136 Arabidopsis lyrata
AL8G45350 5.0kb downstream 5.0kb downstream 7343   true scaffold_8: 22837794-22845136 Arabidopsis lyrata
AL8G45350 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 22837794-22842793 Arabidopsis lyrata
AL8G45350 10.0kb upstream 10.0kb upstream 12343   true scaffold_8: 22842794-22855136 Arabidopsis lyrata
AL8G45350 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 22845137-22855136 Arabidopsis lyrata
AL8G45350 10.0kb downstream 10.0kb downstream 12343   true scaffold_8: 22832794-22845136 Arabidopsis lyrata
AL8G45350 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 22832794-22842793 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369256 5261 Brassicaceae View MSA
123833659 5264 Brassicales-Malvales View MSA
124342565 5266 SBM View MSA
124239700 5268 Malvidae View MSA
124050429 5270 Rosid View MSA
123737696 5271 Pentapetalae View MSA
122785944 5272 Eudicot View MSA
122044592 5273 Angiosperm View MSA
121346334 5274 Embryophyte View MSA
123425870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain