Gene : AL8G43470 A. lyrata v2.1

Defline:  (1 of 2) K00164 - 2-oxoglutarate dehydrogenase E1 component (OGDH, sucA) Genomic Order:  3031
Name:  ? AL8G43470 Secondary Identifier:  ? PAC:35948877

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5084 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G43470 0.5kb upstream 0.5kb upstream 4798   true scaffold_8: 22138217-22143014 Arabidopsis lyrata
AL8G43470 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 22138217-22138716 Arabidopsis lyrata
AL8G43470 0.5kb downstream 0.5kb downstream 4798   true scaffold_8: 22138717-22143514 Arabidopsis lyrata
AL8G43470 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 22143015-22143514 Arabidopsis lyrata
AL8G43470 1.0kb upstream 1.0kb upstream 5298   true scaffold_8: 22137717-22143014 Arabidopsis lyrata
AL8G43470 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 22137717-22138716 Arabidopsis lyrata
AL8G43470 1.0kb downstream 1.0kb downstream 5298   true scaffold_8: 22138717-22144014 Arabidopsis lyrata
AL8G43470 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 22143015-22144014 Arabidopsis lyrata
AL8G43470 2.0kb upstream 2.0kb upstream 6298   true scaffold_8: 22136717-22143014 Arabidopsis lyrata
AL8G43470 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 22136717-22138716 Arabidopsis lyrata
AL8G43470 2.0kb downstream 2.0kb downstream 6298   true scaffold_8: 22138717-22145014 Arabidopsis lyrata
AL8G43470 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 22143015-22145014 Arabidopsis lyrata
AL8G43470 5.0kb upstream 5.0kb upstream 9298   true scaffold_8: 22133717-22143014 Arabidopsis lyrata
AL8G43470 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 22133717-22138716 Arabidopsis lyrata
AL8G43470 5.0kb downstream 5.0kb downstream 9298   true scaffold_8: 22138717-22148014 Arabidopsis lyrata
AL8G43470 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 22143015-22148014 Arabidopsis lyrata
AL8G43470 10.0kb upstream 10.0kb upstream 14298   true scaffold_8: 22128717-22143014 Arabidopsis lyrata
AL8G43470 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 22128717-22138716 Arabidopsis lyrata
AL8G43470 10.0kb downstream 10.0kb downstream 14298   true scaffold_8: 22138717-22153014 Arabidopsis lyrata
AL8G43470 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 22143015-22153014 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365331 5261 Brassicaceae View MSA
123838611 5264 Brassicales-Malvales View MSA
124343365 5266 SBM View MSA
124239767 5268 Malvidae View MSA
124067534 5270 Rosid View MSA
123744941 5271 Pentapetalae View MSA
122793820 5272 Eudicot View MSA
122044869 5273 Angiosperm View MSA
121344749 5274 Embryophyte View MSA
123424102 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain