Gene : AL8G44770 A. lyrata v2.1

Defline:  (1 of 3) PTHR24326:SF281 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATED Genomic Order:  3158
Name:  ? AL8G44770 Secondary Identifier:  ? PAC:35949330

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G44770 0.5kb upstream 0.5kb upstream 2209   true scaffold_8: 22647492-22649700 Arabidopsis lyrata
AL8G44770 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 22649201-22649700 Arabidopsis lyrata
AL8G44770 0.5kb downstream 0.5kb downstream 2209   true scaffold_8: 22646992-22649200 Arabidopsis lyrata
AL8G44770 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 22646992-22647491 Arabidopsis lyrata
AL8G44770 1.0kb upstream 1.0kb upstream 2709   true scaffold_8: 22647492-22650200 Arabidopsis lyrata
AL8G44770 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 22649201-22650200 Arabidopsis lyrata
AL8G44770 1.0kb downstream 1.0kb downstream 2709   true scaffold_8: 22646492-22649200 Arabidopsis lyrata
AL8G44770 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 22646492-22647491 Arabidopsis lyrata
AL8G44770 2.0kb upstream 2.0kb upstream 3709   true scaffold_8: 22647492-22651200 Arabidopsis lyrata
AL8G44770 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 22649201-22651200 Arabidopsis lyrata
AL8G44770 2.0kb downstream 2.0kb downstream 3709   true scaffold_8: 22645492-22649200 Arabidopsis lyrata
AL8G44770 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 22645492-22647491 Arabidopsis lyrata
AL8G44770 5.0kb upstream 5.0kb upstream 6709   true scaffold_8: 22647492-22654200 Arabidopsis lyrata
AL8G44770 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 22649201-22654200 Arabidopsis lyrata
AL8G44770 5.0kb downstream 5.0kb downstream 6709   true scaffold_8: 22642492-22649200 Arabidopsis lyrata
AL8G44770 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 22642492-22647491 Arabidopsis lyrata
AL8G44770 10.0kb upstream 10.0kb upstream 11709   true scaffold_8: 22647492-22659200 Arabidopsis lyrata
AL8G44770 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 22649201-22659200 Arabidopsis lyrata
AL8G44770 10.0kb downstream 10.0kb downstream 11709   true scaffold_8: 22637492-22649200 Arabidopsis lyrata
AL8G44770 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 22637492-22647491 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370323 5261 Brassicaceae View MSA
123842409 5264 Brassicales-Malvales View MSA
124323470 5266 SBM View MSA
124253261 5268 Malvidae View MSA
124061300 5270 Rosid View MSA
123736680 5271 Pentapetalae View MSA
122796133 5272 Eudicot View MSA
122042679 5273 Angiosperm View MSA
121309999 5274 Embryophyte View MSA
123347608 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain