Gene : AL8G42670 A. lyrata v2.1

Defline:  (1 of 3) K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) Genomic Order:  2958
Name:  ? AL8G42670 Secondary Identifier:  ? PAC:35950259

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3781 Arabidopsis lyrata pathologic  
Alyrata PWY-4302 Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY-561 Arabidopsis lyrata pathologic  
Alyrata PWY-5690 Arabidopsis lyrata pathologic  
Alyrata PWY-7279 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G42670 0.5kb upstream 0.5kb upstream 2226   true scaffold_8: 21801887-21804112 Arabidopsis lyrata
AL8G42670 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 21803613-21804112 Arabidopsis lyrata
AL8G42670 0.5kb downstream 0.5kb downstream 2226   true scaffold_8: 21801387-21803612 Arabidopsis lyrata
AL8G42670 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 21801387-21801886 Arabidopsis lyrata
AL8G42670 1.0kb upstream 1.0kb upstream 2726   true scaffold_8: 21801887-21804612 Arabidopsis lyrata
AL8G42670 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 21803613-21804612 Arabidopsis lyrata
AL8G42670 1.0kb downstream 1.0kb downstream 2726   true scaffold_8: 21800887-21803612 Arabidopsis lyrata
AL8G42670 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 21800887-21801886 Arabidopsis lyrata
AL8G42670 2.0kb upstream 2.0kb upstream 3726   true scaffold_8: 21801887-21805612 Arabidopsis lyrata
AL8G42670 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 21803613-21805612 Arabidopsis lyrata
AL8G42670 2.0kb downstream 2.0kb downstream 3726   true scaffold_8: 21799887-21803612 Arabidopsis lyrata
AL8G42670 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 21799887-21801886 Arabidopsis lyrata
AL8G42670 5.0kb upstream 5.0kb upstream 6726   true scaffold_8: 21801887-21808612 Arabidopsis lyrata
AL8G42670 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 21803613-21808612 Arabidopsis lyrata
AL8G42670 5.0kb downstream 5.0kb downstream 6726   true scaffold_8: 21796887-21803612 Arabidopsis lyrata
AL8G42670 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 21796887-21801886 Arabidopsis lyrata
AL8G42670 10.0kb upstream 10.0kb upstream 11726   true scaffold_8: 21801887-21813612 Arabidopsis lyrata
AL8G42670 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 21803613-21813612 Arabidopsis lyrata
AL8G42670 10.0kb downstream 10.0kb downstream 11726   true scaffold_8: 21791887-21803612 Arabidopsis lyrata
AL8G42670 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 21791887-21801886 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360845 5261 Brassicaceae View MSA
123831796 5264 Brassicales-Malvales View MSA
124343953 5266 SBM View MSA
124244083 5268 Malvidae View MSA
124072619 5270 Rosid View MSA
123748072 5271 Pentapetalae View MSA
122787884 5272 Eudicot View MSA
122049105 5273 Angiosperm View MSA
121351479 5274 Embryophyte View MSA
123424532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain