Gene : AL8G42660 A. lyrata v2.1
Defline:  (1 of 2) PTHR22904:SF358 - CC-TETRATRICOPEPTIDE REPEAT PROTEIN Genomic Order:  2957
Name:  ? AL8G42660 Secondary Identifier:  ? PAC:35950137
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0 Pathways

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G42660 0.5kb upstream 0.5kb upstream 3160   true scaffold_8: 21798673-21801832 Arabidopsis lyrata
AL8G42660 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 21801333-21801832 Arabidopsis lyrata
AL8G42660 0.5kb downstream 0.5kb downstream 3160   true scaffold_8: 21798173-21801332 Arabidopsis lyrata
AL8G42660 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 21798173-21798672 Arabidopsis lyrata
AL8G42660 1.0kb upstream 1.0kb upstream 3660   true scaffold_8: 21798673-21802332 Arabidopsis lyrata
AL8G42660 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 21801333-21802332 Arabidopsis lyrata
AL8G42660 1.0kb downstream 1.0kb downstream 3660   true scaffold_8: 21797673-21801332 Arabidopsis lyrata
AL8G42660 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 21797673-21798672 Arabidopsis lyrata
AL8G42660 2.0kb upstream 2.0kb upstream 4660   true scaffold_8: 21798673-21803332 Arabidopsis lyrata
AL8G42660 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 21801333-21803332 Arabidopsis lyrata
AL8G42660 2.0kb downstream 2.0kb downstream 4660   true scaffold_8: 21796673-21801332 Arabidopsis lyrata
AL8G42660 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 21796673-21798672 Arabidopsis lyrata
AL8G42660 5.0kb upstream 5.0kb upstream 7660   true scaffold_8: 21798673-21806332 Arabidopsis lyrata
AL8G42660 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 21801333-21806332 Arabidopsis lyrata
AL8G42660 5.0kb downstream 5.0kb downstream 7660   true scaffold_8: 21793673-21801332 Arabidopsis lyrata
AL8G42660 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 21793673-21798672 Arabidopsis lyrata
AL8G42660 10.0kb upstream 10.0kb upstream 12660   true scaffold_8: 21798673-21811332 Arabidopsis lyrata
AL8G42660 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 21801333-21811332 Arabidopsis lyrata
AL8G42660 10.0kb downstream 10.0kb downstream 12660   true scaffold_8: 21788673-21801332 Arabidopsis lyrata
AL8G42660 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 21788673-21798672 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364740 5261 Brassicaceae View MSA
123838346 5264 Brassicales-Malvales View MSA
124343835 5266 SBM View MSA
124254049 5268 Malvidae View MSA
124063288 5270 Rosid View MSA
123737789 5271 Pentapetalae View MSA
122790297 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain