Gene : AL8G43440 A. lyrata v2.1

Defline:  (1 of 1) 2.8.1.6//2.8.1.7 - Biotin synthase // Cysteine desulfurase / Cysteine desulfurylase Genomic Order:  3028
Name:  ? AL8G43440 Secondary Identifier:  ? PAC:35949897

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-1021 Arabidopsis lyrata pathologic  
Alyrata PWY0-1507 Arabidopsis lyrata pathologic  
Alyrata PWY-6823 Arabidopsis lyrata pathologic  
Alyrata PWY-7250 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G43440 0.5kb upstream 0.5kb upstream 2262   true scaffold_8: 22130697-22132958 Arabidopsis lyrata
AL8G43440 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 22130697-22131196 Arabidopsis lyrata
AL8G43440 0.5kb downstream 0.5kb downstream 2262   true scaffold_8: 22131197-22133458 Arabidopsis lyrata
AL8G43440 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 22132959-22133458 Arabidopsis lyrata
AL8G43440 1.0kb upstream 1.0kb upstream 2762   true scaffold_8: 22130197-22132958 Arabidopsis lyrata
AL8G43440 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 22130197-22131196 Arabidopsis lyrata
AL8G43440 1.0kb downstream 1.0kb downstream 2762   true scaffold_8: 22131197-22133958 Arabidopsis lyrata
AL8G43440 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 22132959-22133958 Arabidopsis lyrata
AL8G43440 2.0kb upstream 2.0kb upstream 3762   true scaffold_8: 22129197-22132958 Arabidopsis lyrata
AL8G43440 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 22129197-22131196 Arabidopsis lyrata
AL8G43440 2.0kb downstream 2.0kb downstream 3762   true scaffold_8: 22131197-22134958 Arabidopsis lyrata
AL8G43440 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 22132959-22134958 Arabidopsis lyrata
AL8G43440 5.0kb upstream 5.0kb upstream 6762   true scaffold_8: 22126197-22132958 Arabidopsis lyrata
AL8G43440 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 22126197-22131196 Arabidopsis lyrata
AL8G43440 5.0kb downstream 5.0kb downstream 6762   true scaffold_8: 22131197-22137958 Arabidopsis lyrata
AL8G43440 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 22132959-22137958 Arabidopsis lyrata
AL8G43440 10.0kb upstream 10.0kb upstream 11762   true scaffold_8: 22121197-22132958 Arabidopsis lyrata
AL8G43440 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 22121197-22131196 Arabidopsis lyrata
AL8G43440 10.0kb downstream 10.0kb downstream 11762   true scaffold_8: 22131197-22142958 Arabidopsis lyrata
AL8G43440 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 22132959-22142958 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363775 5261 Brassicaceae View MSA
123828551 5264 Brassicales-Malvales View MSA
124345894 5266 SBM View MSA
124240027 5268 Malvidae View MSA
124069131 5270 Rosid View MSA
123740340 5271 Pentapetalae View MSA
122791937 5272 Eudicot View MSA
122047383 5273 Angiosperm View MSA
121345399 5274 Embryophyte View MSA
123425014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain