Gene : AL8G41380 A. lyrata v2.1

Defline:  (1 of 4) PTHR31235:SF27 - PEROXIDASE 62-RELATED Genomic Order:  2841
Name:  ? AL8G41380 Secondary Identifier:  ? PAC:35948730

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5466 Arabidopsis lyrata pathologic  
Alyrata PWY-7214 Arabidopsis lyrata pathologic  
Alyrata PWY-7445 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G41380 0.5kb upstream 0.5kb upstream 2546   true scaffold_8: 21304274-21306819 Arabidopsis lyrata
AL8G41380 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 21306320-21306819 Arabidopsis lyrata
AL8G41380 0.5kb downstream 0.5kb downstream 2546   true scaffold_8: 21303774-21306319 Arabidopsis lyrata
AL8G41380 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 21303774-21304273 Arabidopsis lyrata
AL8G41380 1.0kb upstream 1.0kb upstream 3046   true scaffold_8: 21304274-21307319 Arabidopsis lyrata
AL8G41380 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 21306320-21307319 Arabidopsis lyrata
AL8G41380 1.0kb downstream 1.0kb downstream 3046   true scaffold_8: 21303274-21306319 Arabidopsis lyrata
AL8G41380 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 21303274-21304273 Arabidopsis lyrata
AL8G41380 2.0kb upstream 2.0kb upstream 4046   true scaffold_8: 21304274-21308319 Arabidopsis lyrata
AL8G41380 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 21306320-21308319 Arabidopsis lyrata
AL8G41380 2.0kb downstream 2.0kb downstream 4046   true scaffold_8: 21302274-21306319 Arabidopsis lyrata
AL8G41380 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 21302274-21304273 Arabidopsis lyrata
AL8G41380 5.0kb upstream 5.0kb upstream 7046   true scaffold_8: 21304274-21311319 Arabidopsis lyrata
AL8G41380 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 21306320-21311319 Arabidopsis lyrata
AL8G41380 5.0kb downstream 5.0kb downstream 7046   true scaffold_8: 21299274-21306319 Arabidopsis lyrata
AL8G41380 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 21299274-21304273 Arabidopsis lyrata
AL8G41380 10.0kb upstream 10.0kb upstream 12046   true scaffold_8: 21304274-21316319 Arabidopsis lyrata
AL8G41380 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 21306320-21316319 Arabidopsis lyrata
AL8G41380 10.0kb downstream 10.0kb downstream 12046   true scaffold_8: 21294274-21306319 Arabidopsis lyrata
AL8G41380 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 21294274-21304273 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510955 5273 Angiosperm View MSA
122370378 5261 Brassicaceae View MSA
123799950 5264 Brassicales-Malvales View MSA
124297418 5266 SBM View MSA
124149313 5268 Malvidae View MSA
123875141 5270 Rosid View MSA
123459014 5271 Pentapetalae View MSA
122494410 5272 Eudicot View MSA
120784028 5274 Embryophyte View MSA
122825969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain