Gene : AL8G41310 A. lyrata v2.1

Defline:  (1 of 2) K01885 - glutamyl-tRNA synthetase (EARS, gltX) Genomic Order:  2834
Name:  ? AL8G41310 Secondary Identifier:  ? PAC:35949725

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5188 Arabidopsis lyrata pathologic  
Alyrata PWY-5918 Arabidopsis lyrata pathologic  
Alyrata TRNA-CHARGING-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G41310 0.5kb upstream 0.5kb upstream 3877   true scaffold_8: 21277763-21281639 Arabidopsis lyrata
AL8G41310 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 21281140-21281639 Arabidopsis lyrata
AL8G41310 0.5kb downstream 0.5kb downstream 3877   true scaffold_8: 21277263-21281139 Arabidopsis lyrata
AL8G41310 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 21277263-21277762 Arabidopsis lyrata
AL8G41310 1.0kb upstream 1.0kb upstream 4377   true scaffold_8: 21277763-21282139 Arabidopsis lyrata
AL8G41310 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 21281140-21282139 Arabidopsis lyrata
AL8G41310 1.0kb downstream 1.0kb downstream 4377   true scaffold_8: 21276763-21281139 Arabidopsis lyrata
AL8G41310 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 21276763-21277762 Arabidopsis lyrata
AL8G41310 2.0kb upstream 2.0kb upstream 5377   true scaffold_8: 21277763-21283139 Arabidopsis lyrata
AL8G41310 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 21281140-21283139 Arabidopsis lyrata
AL8G41310 2.0kb downstream 2.0kb downstream 5377   true scaffold_8: 21275763-21281139 Arabidopsis lyrata
AL8G41310 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 21275763-21277762 Arabidopsis lyrata
AL8G41310 5.0kb upstream 5.0kb upstream 8377   true scaffold_8: 21277763-21286139 Arabidopsis lyrata
AL8G41310 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 21281140-21286139 Arabidopsis lyrata
AL8G41310 5.0kb downstream 5.0kb downstream 8377   true scaffold_8: 21272763-21281139 Arabidopsis lyrata
AL8G41310 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 21272763-21277762 Arabidopsis lyrata
AL8G41310 10.0kb upstream 10.0kb upstream 13377   true scaffold_8: 21277763-21291139 Arabidopsis lyrata
AL8G41310 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 21281140-21291139 Arabidopsis lyrata
AL8G41310 10.0kb downstream 10.0kb downstream 13377   true scaffold_8: 21267763-21281139 Arabidopsis lyrata
AL8G41310 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 21267763-21277762 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368604 5261 Brassicaceae View MSA
123832530 5264 Brassicales-Malvales View MSA
124344288 5266 SBM View MSA
124238938 5268 Malvidae View MSA
124063360 5270 Rosid View MSA
123737264 5271 Pentapetalae View MSA
122787973 5272 Eudicot View MSA
122041760 5273 Angiosperm View MSA
121345245 5274 Embryophyte View MSA
123424323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain