Gene : AL8G39190 A. lyrata v2.1

Defline:  (1 of 1) PTHR31080:SF19 - PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN Genomic Order:  2637
Name:  ? AL8G39190 Secondary Identifier:  ? PAC:35949780

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G39190 0.5kb upstream 0.5kb upstream 1242   true scaffold_8: 20438346-20439587 Arabidopsis lyrata
AL8G39190 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 20438346-20438845 Arabidopsis lyrata
AL8G39190 0.5kb downstream 0.5kb downstream 1242   true scaffold_8: 20438846-20440087 Arabidopsis lyrata
AL8G39190 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 20439588-20440087 Arabidopsis lyrata
AL8G39190 1.0kb upstream 1.0kb upstream 1742   true scaffold_8: 20437846-20439587 Arabidopsis lyrata
AL8G39190 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 20437846-20438845 Arabidopsis lyrata
AL8G39190 1.0kb downstream 1.0kb downstream 1742   true scaffold_8: 20438846-20440587 Arabidopsis lyrata
AL8G39190 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 20439588-20440587 Arabidopsis lyrata
AL8G39190 2.0kb upstream 2.0kb upstream 2742   true scaffold_8: 20436846-20439587 Arabidopsis lyrata
AL8G39190 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 20436846-20438845 Arabidopsis lyrata
AL8G39190 2.0kb downstream 2.0kb downstream 2742   true scaffold_8: 20438846-20441587 Arabidopsis lyrata
AL8G39190 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 20439588-20441587 Arabidopsis lyrata
AL8G39190 5.0kb upstream 5.0kb upstream 5742   true scaffold_8: 20433846-20439587 Arabidopsis lyrata
AL8G39190 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 20433846-20438845 Arabidopsis lyrata
AL8G39190 5.0kb downstream 5.0kb downstream 5742   true scaffold_8: 20438846-20444587 Arabidopsis lyrata
AL8G39190 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 20439588-20444587 Arabidopsis lyrata
AL8G39190 10.0kb upstream 10.0kb upstream 10742   true scaffold_8: 20428846-20439587 Arabidopsis lyrata
AL8G39190 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 20428846-20438845 Arabidopsis lyrata
AL8G39190 10.0kb downstream 10.0kb downstream 10742   true scaffold_8: 20438846-20449587 Arabidopsis lyrata
AL8G39190 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 20439588-20449587 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376892 5261 Brassicaceae View MSA
123829833 5264 Brassicales-Malvales View MSA
124349206 5266 SBM View MSA
124242648 5268 Malvidae View MSA
124061401 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain