Gene : AL8G40350 A. lyrata v2.1
Defline:  (1 of 11) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  2744
Name:  ? AL8G40350 Secondary Identifier:  ? PAC:35949203
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G40350 0.5kb upstream 0.5kb upstream 1247   true scaffold_8: 20898299-20899545 Arabidopsis lyrata
AL8G40350 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 20899046-20899545 Arabidopsis lyrata
AL8G40350 0.5kb downstream 0.5kb downstream 1247   true scaffold_8: 20897799-20899045 Arabidopsis lyrata
AL8G40350 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 20897799-20898298 Arabidopsis lyrata
AL8G40350 1.0kb upstream 1.0kb upstream 1747   true scaffold_8: 20898299-20900045 Arabidopsis lyrata
AL8G40350 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 20899046-20900045 Arabidopsis lyrata
AL8G40350 1.0kb downstream 1.0kb downstream 1747   true scaffold_8: 20897299-20899045 Arabidopsis lyrata
AL8G40350 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 20897299-20898298 Arabidopsis lyrata
AL8G40350 2.0kb upstream 2.0kb upstream 2747   true scaffold_8: 20898299-20901045 Arabidopsis lyrata
AL8G40350 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 20899046-20901045 Arabidopsis lyrata
AL8G40350 2.0kb downstream 2.0kb downstream 2747   true scaffold_8: 20896299-20899045 Arabidopsis lyrata
AL8G40350 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 20896299-20898298 Arabidopsis lyrata
AL8G40350 5.0kb upstream 5.0kb upstream 5747   true scaffold_8: 20898299-20904045 Arabidopsis lyrata
AL8G40350 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 20899046-20904045 Arabidopsis lyrata
AL8G40350 5.0kb downstream 5.0kb downstream 5747   true scaffold_8: 20893299-20899045 Arabidopsis lyrata
AL8G40350 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 20893299-20898298 Arabidopsis lyrata
AL8G40350 10.0kb upstream 10.0kb upstream 10747   true scaffold_8: 20898299-20909045 Arabidopsis lyrata
AL8G40350 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 20899046-20909045 Arabidopsis lyrata
AL8G40350 10.0kb downstream 10.0kb downstream 10747   true scaffold_8: 20888299-20899045 Arabidopsis lyrata
AL8G40350 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 20888299-20898298 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370428 5261 Brassicaceae View MSA
123839959 5264 Brassicales-Malvales View MSA
124345918 5266 SBM View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain