Gene : AL8G39080 A. lyrata v2.1
Defline:  (1 of 4) PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  2626
Name:  ? AL8G39080 Secondary Identifier:  ? PAC:35949848
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G39080 0.5kb upstream 0.5kb upstream 3156   true scaffold_8: 20400116-20403271 Arabidopsis lyrata
AL8G39080 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 20400116-20400615 Arabidopsis lyrata
AL8G39080 0.5kb downstream 0.5kb downstream 3156   true scaffold_8: 20400616-20403771 Arabidopsis lyrata
AL8G39080 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 20403272-20403771 Arabidopsis lyrata
AL8G39080 1.0kb upstream 1.0kb upstream 3656   true scaffold_8: 20399616-20403271 Arabidopsis lyrata
AL8G39080 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 20399616-20400615 Arabidopsis lyrata
AL8G39080 1.0kb downstream 1.0kb downstream 3656   true scaffold_8: 20400616-20404271 Arabidopsis lyrata
AL8G39080 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 20403272-20404271 Arabidopsis lyrata
AL8G39080 2.0kb upstream 2.0kb upstream 4656   true scaffold_8: 20398616-20403271 Arabidopsis lyrata
AL8G39080 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 20398616-20400615 Arabidopsis lyrata
AL8G39080 2.0kb downstream 2.0kb downstream 4656   true scaffold_8: 20400616-20405271 Arabidopsis lyrata
AL8G39080 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 20403272-20405271 Arabidopsis lyrata
AL8G39080 5.0kb upstream 5.0kb upstream 7656   true scaffold_8: 20395616-20403271 Arabidopsis lyrata
AL8G39080 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 20395616-20400615 Arabidopsis lyrata
AL8G39080 5.0kb downstream 5.0kb downstream 7656   true scaffold_8: 20400616-20408271 Arabidopsis lyrata
AL8G39080 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 20403272-20408271 Arabidopsis lyrata
AL8G39080 10.0kb upstream 10.0kb upstream 12656   true scaffold_8: 20390616-20403271 Arabidopsis lyrata
AL8G39080 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 20390616-20400615 Arabidopsis lyrata
AL8G39080 10.0kb downstream 10.0kb downstream 12656   true scaffold_8: 20400616-20413271 Arabidopsis lyrata
AL8G39080 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 20403272-20413271 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368379 5261 Brassicaceae View MSA
123799558 5264 Brassicales-Malvales View MSA
124297068 5266 SBM View MSA
124251241 5268 Malvidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain