Gene : AL1G18860 A. lyrata v2.1

Defline:  (1 of 1) PTHR11073:SF6 - CALRETICULIN-3 Genomic Order:  841
Name:  ? AL1G18860 Secondary Identifier:  ? PAC:35934361

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G18860 0.5kb upstream 0.5kb upstream 7703   true scaffold_1: 3181779-3189481 Arabidopsis lyrata
AL1G18860 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 3188982-3189481 Arabidopsis lyrata
AL1G18860 0.5kb downstream 0.5kb downstream 7703   true scaffold_1: 3181279-3188981 Arabidopsis lyrata
AL1G18860 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 3181279-3181778 Arabidopsis lyrata
AL1G18860 1.0kb upstream 1.0kb upstream 8203   true scaffold_1: 3181779-3189981 Arabidopsis lyrata
AL1G18860 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 3188982-3189981 Arabidopsis lyrata
AL1G18860 1.0kb downstream 1.0kb downstream 8203   true scaffold_1: 3180779-3188981 Arabidopsis lyrata
AL1G18860 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 3180779-3181778 Arabidopsis lyrata
AL1G18860 2.0kb upstream 2.0kb upstream 9203   true scaffold_1: 3181779-3190981 Arabidopsis lyrata
AL1G18860 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 3188982-3190981 Arabidopsis lyrata
AL1G18860 2.0kb downstream 2.0kb downstream 9203   true scaffold_1: 3179779-3188981 Arabidopsis lyrata
AL1G18860 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 3179779-3181778 Arabidopsis lyrata
AL1G18860 5.0kb upstream 5.0kb upstream 12203   true scaffold_1: 3181779-3193981 Arabidopsis lyrata
AL1G18860 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 3188982-3193981 Arabidopsis lyrata
AL1G18860 5.0kb downstream 5.0kb downstream 12203   true scaffold_1: 3176779-3188981 Arabidopsis lyrata
AL1G18860 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 3176779-3181778 Arabidopsis lyrata
AL1G18860 10.0kb upstream 10.0kb upstream 17203   true scaffold_1: 3181779-3198981 Arabidopsis lyrata
AL1G18860 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 3188982-3198981 Arabidopsis lyrata
AL1G18860 10.0kb downstream 10.0kb downstream 17203   true scaffold_1: 3171779-3188981 Arabidopsis lyrata
AL1G18860 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 3171779-3181778 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378514 5261 Brassicaceae View MSA
123834511 5264 Brassicales-Malvales View MSA
124336734 5266 SBM View MSA
124248219 5268 Malvidae View MSA
124065658 5270 Rosid View MSA
123739640 5271 Pentapetalae View MSA
122789782 5272 Eudicot View MSA
122048001 5273 Angiosperm View MSA
121351092 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain