Gene : AL1G17380 A. lyrata v2.1

Defline:  (1 of 3) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I Genomic Order:  703
Name:  ? AL1G17380 Secondary Identifier:  ? PAC:35930319

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata LIPASYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G17380 0.5kb upstream 0.5kb upstream 1795   true scaffold_1: 2653236-2655030 Arabidopsis lyrata
AL1G17380 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 2654531-2655030 Arabidopsis lyrata
AL1G17380 0.5kb downstream 0.5kb downstream 1795   true scaffold_1: 2652736-2654530 Arabidopsis lyrata
AL1G17380 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 2652736-2653235 Arabidopsis lyrata
AL1G17380 1.0kb upstream 1.0kb upstream 2295   true scaffold_1: 2653236-2655530 Arabidopsis lyrata
AL1G17380 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 2654531-2655530 Arabidopsis lyrata
AL1G17380 1.0kb downstream 1.0kb downstream 2295   true scaffold_1: 2652236-2654530 Arabidopsis lyrata
AL1G17380 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 2652236-2653235 Arabidopsis lyrata
AL1G17380 2.0kb upstream 2.0kb upstream 3295   true scaffold_1: 2653236-2656530 Arabidopsis lyrata
AL1G17380 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 2654531-2656530 Arabidopsis lyrata
AL1G17380 2.0kb downstream 2.0kb downstream 3295   true scaffold_1: 2651236-2654530 Arabidopsis lyrata
AL1G17380 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 2651236-2653235 Arabidopsis lyrata
AL1G17380 5.0kb upstream 5.0kb upstream 6295   true scaffold_1: 2653236-2659530 Arabidopsis lyrata
AL1G17380 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 2654531-2659530 Arabidopsis lyrata
AL1G17380 5.0kb downstream 5.0kb downstream 6295   true scaffold_1: 2648236-2654530 Arabidopsis lyrata
AL1G17380 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 2648236-2653235 Arabidopsis lyrata
AL1G17380 10.0kb upstream 10.0kb upstream 11295   true scaffold_1: 2653236-2664530 Arabidopsis lyrata
AL1G17380 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 2654531-2664530 Arabidopsis lyrata
AL1G17380 10.0kb downstream 10.0kb downstream 11295   true scaffold_1: 2643236-2654530 Arabidopsis lyrata
AL1G17380 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 2643236-2653235 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344225 5261 Brassicaceae View MSA
123784263 5264 Brassicales-Malvales View MSA
124282458 5266 SBM View MSA
124137060 5268 Malvidae View MSA
124037324 5270 Rosid View MSA
123739032 5271 Pentapetalae View MSA
122769943 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain