Gene : AL1G18170 A. lyrata v2.1

Defline:  (1 of 2) PTHR31356:SF10 - L-ASCORBATE PEROXIDASE 2, CYTOSOLIC Genomic Order:  779
Name:  ? AL1G18170 Secondary Identifier:  ? PAC:35931667

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-2261 Arabidopsis lyrata pathologic  
Alyrata PWY-6959 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G18170 0.5kb upstream 0.5kb upstream 2763   true scaffold_1: 2908872-2911634 Arabidopsis lyrata
AL1G18170 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 2908872-2909371 Arabidopsis lyrata
AL1G18170 0.5kb downstream 0.5kb downstream 2763   true scaffold_1: 2909372-2912134 Arabidopsis lyrata
AL1G18170 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 2911635-2912134 Arabidopsis lyrata
AL1G18170 1.0kb upstream 1.0kb upstream 3263   true scaffold_1: 2908372-2911634 Arabidopsis lyrata
AL1G18170 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 2908372-2909371 Arabidopsis lyrata
AL1G18170 1.0kb downstream 1.0kb downstream 3263   true scaffold_1: 2909372-2912634 Arabidopsis lyrata
AL1G18170 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 2911635-2912634 Arabidopsis lyrata
AL1G18170 2.0kb upstream 2.0kb upstream 4263   true scaffold_1: 2907372-2911634 Arabidopsis lyrata
AL1G18170 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 2907372-2909371 Arabidopsis lyrata
AL1G18170 2.0kb downstream 2.0kb downstream 4263   true scaffold_1: 2909372-2913634 Arabidopsis lyrata
AL1G18170 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 2911635-2913634 Arabidopsis lyrata
AL1G18170 5.0kb upstream 5.0kb upstream 7263   true scaffold_1: 2904372-2911634 Arabidopsis lyrata
AL1G18170 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 2904372-2909371 Arabidopsis lyrata
AL1G18170 5.0kb downstream 5.0kb downstream 7263   true scaffold_1: 2909372-2916634 Arabidopsis lyrata
AL1G18170 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 2911635-2916634 Arabidopsis lyrata
AL1G18170 10.0kb upstream 10.0kb upstream 12263   true scaffold_1: 2899372-2911634 Arabidopsis lyrata
AL1G18170 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 2899372-2909371 Arabidopsis lyrata
AL1G18170 10.0kb downstream 10.0kb downstream 12263   true scaffold_1: 2909372-2921634 Arabidopsis lyrata
AL1G18170 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 2911635-2921634 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365618 5261 Brassicaceae View MSA
123839523 5264 Brassicales-Malvales View MSA
124339715 5266 SBM View MSA
124248895 5268 Malvidae View MSA
124068994 5270 Rosid View MSA
123741454 5271 Pentapetalae View MSA
122796920 5272 Eudicot View MSA
122044564 5273 Angiosperm View MSA
121344996 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain