Gene : AL1G14020 A. lyrata v2.1

Defline:  (1 of 3) K00025 - malate dehydrogenase (MDH1) Genomic Order:  385
Name:  ? AL1G14020 Secondary Identifier:  ? PAC:35932469

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUCONEO-PWY Arabidopsis lyrata pathologic  
Alyrata GLYOXYLATE-BYPASS Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY-561 Arabidopsis lyrata pathologic  
Alyrata PWY-5690 Arabidopsis lyrata pathologic  
Alyrata PWY66-399 Arabidopsis lyrata pathologic  
Alyrata PWY-7115 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G14020 0.5kb upstream 0.5kb upstream 3079   true scaffold_1: 1436469-1439547 Arabidopsis lyrata
AL1G14020 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 1439048-1439547 Arabidopsis lyrata
AL1G14020 0.5kb downstream 0.5kb downstream 3079   true scaffold_1: 1435969-1439047 Arabidopsis lyrata
AL1G14020 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 1435969-1436468 Arabidopsis lyrata
AL1G14020 1.0kb upstream 1.0kb upstream 3579   true scaffold_1: 1436469-1440047 Arabidopsis lyrata
AL1G14020 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 1439048-1440047 Arabidopsis lyrata
AL1G14020 1.0kb downstream 1.0kb downstream 3579   true scaffold_1: 1435469-1439047 Arabidopsis lyrata
AL1G14020 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 1435469-1436468 Arabidopsis lyrata
AL1G14020 2.0kb upstream 2.0kb upstream 4579   true scaffold_1: 1436469-1441047 Arabidopsis lyrata
AL1G14020 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 1439048-1441047 Arabidopsis lyrata
AL1G14020 2.0kb downstream 2.0kb downstream 4579   true scaffold_1: 1434469-1439047 Arabidopsis lyrata
AL1G14020 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 1434469-1436468 Arabidopsis lyrata
AL1G14020 5.0kb upstream 5.0kb upstream 7579   true scaffold_1: 1436469-1444047 Arabidopsis lyrata
AL1G14020 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 1439048-1444047 Arabidopsis lyrata
AL1G14020 5.0kb downstream 5.0kb downstream 7579   true scaffold_1: 1431469-1439047 Arabidopsis lyrata
AL1G14020 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 1431469-1436468 Arabidopsis lyrata
AL1G14020 10.0kb upstream 10.0kb upstream 12579   true scaffold_1: 1436469-1449047 Arabidopsis lyrata
AL1G14020 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 1439048-1449047 Arabidopsis lyrata
AL1G14020 10.0kb downstream 10.0kb downstream 12579   true scaffold_1: 1426469-1439047 Arabidopsis lyrata
AL1G14020 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 1426469-1436468 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379151 5261 Brassicaceae View MSA
123832560 5264 Brassicales-Malvales View MSA
124339900 5266 SBM View MSA
124244988 5268 Malvidae View MSA
124064013 5270 Rosid View MSA
123739138 5271 Pentapetalae View MSA
122789281 5272 Eudicot View MSA
122050336 5273 Angiosperm View MSA
121345674 5274 Embryophyte View MSA
123426378 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain