Gene : AL1G12740 A. lyrata v2.1

Defline:  (1 of 1) PTHR32019:SF2 - R3H DOMAIN-CONTAINING PROTEIN 4 Genomic Order:  262
Name:  ? AL1G12740 Secondary Identifier:  ? PAC:35932238

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G12740 0.5kb upstream 0.5kb upstream 2455   true scaffold_1: 949705-952159 Arabidopsis lyrata
AL1G12740 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 951660-952159 Arabidopsis lyrata
AL1G12740 0.5kb downstream 0.5kb downstream 2455   true scaffold_1: 949205-951659 Arabidopsis lyrata
AL1G12740 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 949205-949704 Arabidopsis lyrata
AL1G12740 1.0kb upstream 1.0kb upstream 2955   true scaffold_1: 949705-952659 Arabidopsis lyrata
AL1G12740 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 951660-952659 Arabidopsis lyrata
AL1G12740 1.0kb downstream 1.0kb downstream 2955   true scaffold_1: 948705-951659 Arabidopsis lyrata
AL1G12740 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 948705-949704 Arabidopsis lyrata
AL1G12740 2.0kb upstream 2.0kb upstream 3955   true scaffold_1: 949705-953659 Arabidopsis lyrata
AL1G12740 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 951660-953659 Arabidopsis lyrata
AL1G12740 2.0kb downstream 2.0kb downstream 3955   true scaffold_1: 947705-951659 Arabidopsis lyrata
AL1G12740 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 947705-949704 Arabidopsis lyrata
AL1G12740 5.0kb upstream 5.0kb upstream 6955   true scaffold_1: 949705-956659 Arabidopsis lyrata
AL1G12740 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 951660-956659 Arabidopsis lyrata
AL1G12740 5.0kb downstream 5.0kb downstream 6955   true scaffold_1: 944705-951659 Arabidopsis lyrata
AL1G12740 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 944705-949704 Arabidopsis lyrata
AL1G12740 10.0kb upstream 10.0kb upstream 11955   true scaffold_1: 949705-961659 Arabidopsis lyrata
AL1G12740 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 951660-961659 Arabidopsis lyrata
AL1G12740 10.0kb downstream 10.0kb downstream 11955   true scaffold_1: 939705-951659 Arabidopsis lyrata
AL1G12740 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 939705-949704 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363434 5261 Brassicaceae View MSA
123830614 5264 Brassicales-Malvales View MSA
124343870 5266 SBM View MSA
124238039 5268 Malvidae View MSA
124069117 5270 Rosid View MSA
123737199 5271 Pentapetalae View MSA
122790872 5272 Eudicot View MSA
122042541 5273 Angiosperm View MSA
123428951 5275 Viridiplantae View MSA
121347300 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain