Gene : AL1G11400 A. lyrata v2.1

Defline:  (1 of 4) 2.3.1.119 - Transferred entry: 1.1.1.330, 1.3.1.93, 2.3.1.199 and 4.2.1.134 Genomic Order:  134
Name:  ? AL1G11400 Secondary Identifier:  ? PAC:35932224

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5080 Arabidopsis lyrata pathologic  
Alyrata PWY-6433 Arabidopsis lyrata pathologic  
Alyrata PWY-6598 Arabidopsis lyrata pathologic  
Alyrata PWY-7036 Arabidopsis lyrata pathologic  
Alyrata PWY-7601 Arabidopsis lyrata pathologic  
Alyrata PWY-7606 Arabidopsis lyrata pathologic  
Alyrata PWY-7619 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G11400 0.5kb upstream 0.5kb upstream 2345   true scaffold_1: 474940-477284 Arabidopsis lyrata
AL1G11400 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 474940-475439 Arabidopsis lyrata
AL1G11400 0.5kb downstream 0.5kb downstream 2345   true scaffold_1: 475440-477784 Arabidopsis lyrata
AL1G11400 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 477285-477784 Arabidopsis lyrata
AL1G11400 1.0kb upstream 1.0kb upstream 2845   true scaffold_1: 474440-477284 Arabidopsis lyrata
AL1G11400 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 474440-475439 Arabidopsis lyrata
AL1G11400 1.0kb downstream 1.0kb downstream 2845   true scaffold_1: 475440-478284 Arabidopsis lyrata
AL1G11400 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 477285-478284 Arabidopsis lyrata
AL1G11400 2.0kb upstream 2.0kb upstream 3845   true scaffold_1: 473440-477284 Arabidopsis lyrata
AL1G11400 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 473440-475439 Arabidopsis lyrata
AL1G11400 2.0kb downstream 2.0kb downstream 3845   true scaffold_1: 475440-479284 Arabidopsis lyrata
AL1G11400 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 477285-479284 Arabidopsis lyrata
AL1G11400 5.0kb upstream 5.0kb upstream 6845   true scaffold_1: 470440-477284 Arabidopsis lyrata
AL1G11400 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 470440-475439 Arabidopsis lyrata
AL1G11400 5.0kb downstream 5.0kb downstream 6845   true scaffold_1: 475440-482284 Arabidopsis lyrata
AL1G11400 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 477285-482284 Arabidopsis lyrata
AL1G11400 10.0kb upstream 10.0kb upstream 11845   true scaffold_1: 465440-477284 Arabidopsis lyrata
AL1G11400 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 465440-475439 Arabidopsis lyrata
AL1G11400 10.0kb downstream 10.0kb downstream 11845   true scaffold_1: 475440-487284 Arabidopsis lyrata
AL1G11400 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 477285-487284 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372811 5261 Brassicaceae View MSA
123836168 5264 Brassicales-Malvales View MSA
124350063 5266 SBM View MSA
124238409 5268 Malvidae View MSA
124063458 5270 Rosid View MSA
123736386 5271 Pentapetalae View MSA
122785995 5272 Eudicot View MSA
122048379 5273 Angiosperm View MSA
121310944 5274 Embryophyte View MSA
123348313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain