Gene : AL1G11260 A. lyrata v2.1

Defline:  (1 of 1) 2.7.1.52 - Fucokinase / L-fucose kinase Genomic Order:  122
Name:  ? AL1G11260 Secondary Identifier:  ? PAC:35931697

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G11260 0.5kb upstream 0.5kb upstream 4473   true scaffold_1: 431963-436435 Arabidopsis lyrata
AL1G11260 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 435936-436435 Arabidopsis lyrata
AL1G11260 0.5kb downstream 0.5kb downstream 4473   true scaffold_1: 431463-435935 Arabidopsis lyrata
AL1G11260 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 431463-431962 Arabidopsis lyrata
AL1G11260 1.0kb upstream 1.0kb upstream 4973   true scaffold_1: 431963-436935 Arabidopsis lyrata
AL1G11260 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 435936-436935 Arabidopsis lyrata
AL1G11260 1.0kb downstream 1.0kb downstream 4973   true scaffold_1: 430963-435935 Arabidopsis lyrata
AL1G11260 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 430963-431962 Arabidopsis lyrata
AL1G11260 2.0kb upstream 2.0kb upstream 5973   true scaffold_1: 431963-437935 Arabidopsis lyrata
AL1G11260 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 435936-437935 Arabidopsis lyrata
AL1G11260 2.0kb downstream 2.0kb downstream 5973   true scaffold_1: 429963-435935 Arabidopsis lyrata
AL1G11260 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 429963-431962 Arabidopsis lyrata
AL1G11260 5.0kb upstream 5.0kb upstream 8973   true scaffold_1: 431963-440935 Arabidopsis lyrata
AL1G11260 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 435936-440935 Arabidopsis lyrata
AL1G11260 5.0kb downstream 5.0kb downstream 8973   true scaffold_1: 426963-435935 Arabidopsis lyrata
AL1G11260 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 426963-431962 Arabidopsis lyrata
AL1G11260 10.0kb upstream 10.0kb upstream 13973   true scaffold_1: 431963-445935 Arabidopsis lyrata
AL1G11260 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 435936-445935 Arabidopsis lyrata
AL1G11260 10.0kb downstream 10.0kb downstream 13973   true scaffold_1: 421963-435935 Arabidopsis lyrata
AL1G11260 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 421963-431962 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366349 5261 Brassicaceae View MSA
123830009 5264 Brassicales-Malvales View MSA
124338053 5266 SBM View MSA
124239737 5268 Malvidae View MSA
124065947 5270 Rosid View MSA
123736702 5271 Pentapetalae View MSA
122792223 5272 Eudicot View MSA
122043960 5273 Angiosperm View MSA
121344120 5274 Embryophyte View MSA
123379978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain