Gene : AL1G10240 A. lyrata v2.1
Defline:  (1 of 3) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  25
Name:  ? AL1G10240 Secondary Identifier:  ? PAC:35932799
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G10240 0.5kb upstream 0.5kb upstream 2056   true scaffold_1: 80416-82471 Arabidopsis lyrata
AL1G10240 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 80416-80915 Arabidopsis lyrata
AL1G10240 0.5kb downstream 0.5kb downstream 2056   true scaffold_1: 80916-82971 Arabidopsis lyrata
AL1G10240 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 82472-82971 Arabidopsis lyrata
AL1G10240 1.0kb upstream 1.0kb upstream 2556   true scaffold_1: 79916-82471 Arabidopsis lyrata
AL1G10240 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 79916-80915 Arabidopsis lyrata
AL1G10240 1.0kb downstream 1.0kb downstream 2556   true scaffold_1: 80916-83471 Arabidopsis lyrata
AL1G10240 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 82472-83471 Arabidopsis lyrata
AL1G10240 2.0kb upstream 2.0kb upstream 3556   true scaffold_1: 78916-82471 Arabidopsis lyrata
AL1G10240 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 78916-80915 Arabidopsis lyrata
AL1G10240 2.0kb downstream 2.0kb downstream 3556   true scaffold_1: 80916-84471 Arabidopsis lyrata
AL1G10240 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 82472-84471 Arabidopsis lyrata
AL1G10240 5.0kb upstream 5.0kb upstream 6556   true scaffold_1: 75916-82471 Arabidopsis lyrata
AL1G10240 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 75916-80915 Arabidopsis lyrata
AL1G10240 5.0kb downstream 5.0kb downstream 6556   true scaffold_1: 80916-87471 Arabidopsis lyrata
AL1G10240 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 82472-87471 Arabidopsis lyrata
AL1G10240 10.0kb upstream 10.0kb upstream 11556   true scaffold_1: 70916-82471 Arabidopsis lyrata
AL1G10240 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 70916-80915 Arabidopsis lyrata
AL1G10240 10.0kb downstream 10.0kb downstream 11556   true scaffold_1: 80916-92471 Arabidopsis lyrata
AL1G10240 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 82472-92471 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376828 5261 Brassicaceae View MSA
123828982 5264 Brassicales-Malvales View MSA
124336806 5266 SBM View MSA
124239117 5268 Malvidae View MSA
124068304 5270 Rosid View MSA
123739380 5271 Pentapetalae View MSA
122792095 5272 Eudicot View MSA
122045794 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain