Gene : AL1G10080 A. lyrata v2.1

Defline:  (1 of 1) 2.4.1.260 - Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichol alpha-1,6-mannosyltransferase / Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl alpha-6-mannosyltransferase Genomic Order:  8
Name:  ? AL1G10080 Secondary Identifier:  ? PAC:35932424

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G10080 0.5kb upstream 0.5kb upstream 4515   true scaffold_1: 15477-19991 Arabidopsis lyrata
AL1G10080 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 19492-19991 Arabidopsis lyrata
AL1G10080 0.5kb downstream 0.5kb downstream 4515   true scaffold_1: 14977-19491 Arabidopsis lyrata
AL1G10080 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 14977-15476 Arabidopsis lyrata
AL1G10080 1.0kb upstream 1.0kb upstream 5015   true scaffold_1: 15477-20491 Arabidopsis lyrata
AL1G10080 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 19492-20491 Arabidopsis lyrata
AL1G10080 1.0kb downstream 1.0kb downstream 5015   true scaffold_1: 14477-19491 Arabidopsis lyrata
AL1G10080 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 14477-15476 Arabidopsis lyrata
AL1G10080 2.0kb upstream 2.0kb upstream 6015   true scaffold_1: 15477-21491 Arabidopsis lyrata
AL1G10080 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 19492-21491 Arabidopsis lyrata
AL1G10080 2.0kb downstream 2.0kb downstream 6015   true scaffold_1: 13477-19491 Arabidopsis lyrata
AL1G10080 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 13477-15476 Arabidopsis lyrata
AL1G10080 5.0kb upstream 5.0kb upstream 9015   true scaffold_1: 15477-24491 Arabidopsis lyrata
AL1G10080 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 19492-24491 Arabidopsis lyrata
AL1G10080 5.0kb downstream 5.0kb downstream 9015   true scaffold_1: 10477-19491 Arabidopsis lyrata
AL1G10080 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 10477-15476 Arabidopsis lyrata
AL1G10080 10.0kb upstream 10.0kb upstream 14015   true scaffold_1: 15477-29491 Arabidopsis lyrata
AL1G10080 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 19492-29491 Arabidopsis lyrata
AL1G10080 10.0kb downstream 10.0kb downstream 14015   true scaffold_1: 5477-19491 Arabidopsis lyrata
AL1G10080 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 5477-15476 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375576 5261 Brassicaceae View MSA
123840299 5264 Brassicales-Malvales View MSA
124345602 5266 SBM View MSA
124251760 5268 Malvidae View MSA
124065105 5270 Rosid View MSA
123738429 5271 Pentapetalae View MSA
122789475 5272 Eudicot View MSA
122046384 5273 Angiosperm View MSA
121345023 5274 Embryophyte View MSA
123424059 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain