Gene : AL1G28820 A. lyrata v2.1

Defline:  (1 of 1) PTHR12496 - CGI-41 METHYLTRANSFERASE Genomic Order:  1797
Name:  ? AL1G28820 Secondary Identifier:  ? PAC:35930618

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G28820 0.5kb upstream 0.5kb upstream 3955   true scaffold_1: 6978558-6982512 Arabidopsis lyrata
AL1G28820 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 6978558-6979057 Arabidopsis lyrata
AL1G28820 0.5kb downstream 0.5kb downstream 3955   true scaffold_1: 6979058-6983012 Arabidopsis lyrata
AL1G28820 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 6982513-6983012 Arabidopsis lyrata
AL1G28820 1.0kb upstream 1.0kb upstream 4455   true scaffold_1: 6978058-6982512 Arabidopsis lyrata
AL1G28820 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 6978058-6979057 Arabidopsis lyrata
AL1G28820 1.0kb downstream 1.0kb downstream 4455   true scaffold_1: 6979058-6983512 Arabidopsis lyrata
AL1G28820 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 6982513-6983512 Arabidopsis lyrata
AL1G28820 2.0kb upstream 2.0kb upstream 5455   true scaffold_1: 6977058-6982512 Arabidopsis lyrata
AL1G28820 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 6977058-6979057 Arabidopsis lyrata
AL1G28820 2.0kb downstream 2.0kb downstream 5455   true scaffold_1: 6979058-6984512 Arabidopsis lyrata
AL1G28820 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 6982513-6984512 Arabidopsis lyrata
AL1G28820 5.0kb upstream 5.0kb upstream 8455   true scaffold_1: 6974058-6982512 Arabidopsis lyrata
AL1G28820 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 6974058-6979057 Arabidopsis lyrata
AL1G28820 5.0kb downstream 5.0kb downstream 8455   true scaffold_1: 6979058-6987512 Arabidopsis lyrata
AL1G28820 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 6982513-6987512 Arabidopsis lyrata
AL1G28820 10.0kb upstream 10.0kb upstream 13455   true scaffold_1: 6969058-6982512 Arabidopsis lyrata
AL1G28820 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 6969058-6979057 Arabidopsis lyrata
AL1G28820 10.0kb downstream 10.0kb downstream 13455   true scaffold_1: 6979058-6992512 Arabidopsis lyrata
AL1G28820 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 6982513-6992512 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041435 5273 Angiosperm View MSA
122366508 5261 Brassicaceae View MSA
123834166 5264 Brassicales-Malvales View MSA
124321929 5266 SBM View MSA
124238986 5268 Malvidae View MSA
124063111 5270 Rosid View MSA
123747553 5271 Pentapetalae View MSA
122789277 5272 Eudicot View MSA
121344340 5274 Embryophyte View MSA
123380024 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain