Gene : AL1G28890 A. lyrata v2.1

Defline:  (1 of 1) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  1804
Name:  ? AL1G28890 Secondary Identifier:  ? PAC:35933186

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G28890 0.5kb upstream 0.5kb upstream 4059   true scaffold_1: 7006798-7010856 Arabidopsis lyrata
AL1G28890 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 7006798-7007297 Arabidopsis lyrata
AL1G28890 0.5kb downstream 0.5kb downstream 4059   true scaffold_1: 7007298-7011356 Arabidopsis lyrata
AL1G28890 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 7010857-7011356 Arabidopsis lyrata
AL1G28890 1.0kb upstream 1.0kb upstream 4559   true scaffold_1: 7006298-7010856 Arabidopsis lyrata
AL1G28890 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 7006298-7007297 Arabidopsis lyrata
AL1G28890 1.0kb downstream 1.0kb downstream 4559   true scaffold_1: 7007298-7011856 Arabidopsis lyrata
AL1G28890 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 7010857-7011856 Arabidopsis lyrata
AL1G28890 2.0kb upstream 2.0kb upstream 5559   true scaffold_1: 7005298-7010856 Arabidopsis lyrata
AL1G28890 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 7005298-7007297 Arabidopsis lyrata
AL1G28890 2.0kb downstream 2.0kb downstream 5559   true scaffold_1: 7007298-7012856 Arabidopsis lyrata
AL1G28890 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 7010857-7012856 Arabidopsis lyrata
AL1G28890 5.0kb upstream 5.0kb upstream 8559   true scaffold_1: 7002298-7010856 Arabidopsis lyrata
AL1G28890 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 7002298-7007297 Arabidopsis lyrata
AL1G28890 5.0kb downstream 5.0kb downstream 8559   true scaffold_1: 7007298-7015856 Arabidopsis lyrata
AL1G28890 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 7010857-7015856 Arabidopsis lyrata
AL1G28890 10.0kb upstream 10.0kb upstream 13559   true scaffold_1: 6997298-7010856 Arabidopsis lyrata
AL1G28890 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 6997298-7007297 Arabidopsis lyrata
AL1G28890 10.0kb downstream 10.0kb downstream 13559   true scaffold_1: 7007298-7020856 Arabidopsis lyrata
AL1G28890 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 7010857-7020856 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373721 5261 Brassicaceae View MSA
123838625 5264 Brassicales-Malvales View MSA
124340565 5266 SBM View MSA
124242246 5268 Malvidae View MSA
124060991 5270 Rosid View MSA
123739581 5271 Pentapetalae View MSA
122792894 5272 Eudicot View MSA
122046159 5273 Angiosperm View MSA
121349944 5274 Embryophyte View MSA
123424676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain