Gene : AL1G27900 A. lyrata v2.1
Defline:  (1 of 3) K14972 - PAX-interacting protein 1 (PAXIP1, PTIP) Genomic Order:  1708
Name:  ? AL1G27900 Secondary Identifier:  ? PAC:35933716
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G27900 0.5kb upstream 0.5kb upstream 3646   true scaffold_1: 6661523-6665168 Arabidopsis lyrata
AL1G27900 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 6664669-6665168 Arabidopsis lyrata
AL1G27900 0.5kb downstream 0.5kb downstream 3646   true scaffold_1: 6661023-6664668 Arabidopsis lyrata
AL1G27900 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 6661023-6661522 Arabidopsis lyrata
AL1G27900 1.0kb upstream 1.0kb upstream 4146   true scaffold_1: 6661523-6665668 Arabidopsis lyrata
AL1G27900 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 6664669-6665668 Arabidopsis lyrata
AL1G27900 1.0kb downstream 1.0kb downstream 4146   true scaffold_1: 6660523-6664668 Arabidopsis lyrata
AL1G27900 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 6660523-6661522 Arabidopsis lyrata
AL1G27900 2.0kb upstream 2.0kb upstream 5146   true scaffold_1: 6661523-6666668 Arabidopsis lyrata
AL1G27900 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 6664669-6666668 Arabidopsis lyrata
AL1G27900 2.0kb downstream 2.0kb downstream 5146   true scaffold_1: 6659523-6664668 Arabidopsis lyrata
AL1G27900 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 6659523-6661522 Arabidopsis lyrata
AL1G27900 5.0kb upstream 5.0kb upstream 8146   true scaffold_1: 6661523-6669668 Arabidopsis lyrata
AL1G27900 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 6664669-6669668 Arabidopsis lyrata
AL1G27900 5.0kb downstream 5.0kb downstream 8146   true scaffold_1: 6656523-6664668 Arabidopsis lyrata
AL1G27900 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 6656523-6661522 Arabidopsis lyrata
AL1G27900 10.0kb upstream 10.0kb upstream 13146   true scaffold_1: 6661523-6674668 Arabidopsis lyrata
AL1G27900 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 6664669-6674668 Arabidopsis lyrata
AL1G27900 10.0kb downstream 10.0kb downstream 13146   true scaffold_1: 6651523-6664668 Arabidopsis lyrata
AL1G27900 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 6651523-6661522 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122327511 5261 Brassicaceae View MSA
123768935 5264 Brassicales-Malvales View MSA
124267512 5266 SBM View MSA
124123828 5268 Malvidae View MSA
124039086 5270 Rosid View MSA
123752539 5271 Pentapetalae View MSA
122797451 5272 Eudicot View MSA
122048270 5273 Angiosperm View MSA
121350628 5274 Embryophyte View MSA
123381823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain