Gene : AL1G27380 A. lyrata v2.1
Defline:  (1 of 1) PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  1658
Name:  ? AL1G27380 Secondary Identifier:  ? PAC:35930901
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G27380 0.5kb upstream 0.5kb upstream 9026   true scaffold_1: 6460518-6469543 Arabidopsis lyrata
AL1G27380 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 6469044-6469543 Arabidopsis lyrata
AL1G27380 0.5kb downstream 0.5kb downstream 9026   true scaffold_1: 6460018-6469043 Arabidopsis lyrata
AL1G27380 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 6460018-6460517 Arabidopsis lyrata
AL1G27380 1.0kb upstream 1.0kb upstream 9526   true scaffold_1: 6460518-6470043 Arabidopsis lyrata
AL1G27380 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 6469044-6470043 Arabidopsis lyrata
AL1G27380 1.0kb downstream 1.0kb downstream 9526   true scaffold_1: 6459518-6469043 Arabidopsis lyrata
AL1G27380 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 6459518-6460517 Arabidopsis lyrata
AL1G27380 2.0kb upstream 2.0kb upstream 10526   true scaffold_1: 6460518-6471043 Arabidopsis lyrata
AL1G27380 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 6469044-6471043 Arabidopsis lyrata
AL1G27380 2.0kb downstream 2.0kb downstream 10526   true scaffold_1: 6458518-6469043 Arabidopsis lyrata
AL1G27380 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 6458518-6460517 Arabidopsis lyrata
AL1G27380 5.0kb upstream 5.0kb upstream 13526   true scaffold_1: 6460518-6474043 Arabidopsis lyrata
AL1G27380 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 6469044-6474043 Arabidopsis lyrata
AL1G27380 5.0kb downstream 5.0kb downstream 13526   true scaffold_1: 6455518-6469043 Arabidopsis lyrata
AL1G27380 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 6455518-6460517 Arabidopsis lyrata
AL1G27380 10.0kb upstream 10.0kb upstream 18526   true scaffold_1: 6460518-6479043 Arabidopsis lyrata
AL1G27380 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 6469044-6479043 Arabidopsis lyrata
AL1G27380 10.0kb downstream 10.0kb downstream 18526   true scaffold_1: 6450518-6469043 Arabidopsis lyrata
AL1G27380 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 6450518-6460517 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369106 5261 Brassicaceae View MSA
123832970 5264 Brassicales-Malvales View MSA
124346506 5266 SBM View MSA
124243651 5268 Malvidae View MSA
124073724 5270 Rosid View MSA
123753708 5271 Pentapetalae View MSA
122789807 5272 Eudicot View MSA
122044017 5273 Angiosperm View MSA
121347327 5274 Embryophyte View MSA
123427490 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain