Gene : AL1G27600 A. lyrata v2.1
Defline:  (1 of 13) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1679
Name:  ? AL1G27600 Secondary Identifier:  ? PAC:35935724
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G27600 0.5kb upstream 0.5kb upstream 3117   true scaffold_1: 6524366-6527482 Arabidopsis lyrata
AL1G27600 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 6524366-6524865 Arabidopsis lyrata
AL1G27600 0.5kb downstream 0.5kb downstream 3117   true scaffold_1: 6524866-6527982 Arabidopsis lyrata
AL1G27600 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 6527483-6527982 Arabidopsis lyrata
AL1G27600 1.0kb upstream 1.0kb upstream 3617   true scaffold_1: 6523866-6527482 Arabidopsis lyrata
AL1G27600 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 6523866-6524865 Arabidopsis lyrata
AL1G27600 1.0kb downstream 1.0kb downstream 3617   true scaffold_1: 6524866-6528482 Arabidopsis lyrata
AL1G27600 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 6527483-6528482 Arabidopsis lyrata
AL1G27600 2.0kb upstream 2.0kb upstream 4617   true scaffold_1: 6522866-6527482 Arabidopsis lyrata
AL1G27600 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 6522866-6524865 Arabidopsis lyrata
AL1G27600 2.0kb downstream 2.0kb downstream 4617   true scaffold_1: 6524866-6529482 Arabidopsis lyrata
AL1G27600 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 6527483-6529482 Arabidopsis lyrata
AL1G27600 5.0kb upstream 5.0kb upstream 7617   true scaffold_1: 6519866-6527482 Arabidopsis lyrata
AL1G27600 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 6519866-6524865 Arabidopsis lyrata
AL1G27600 5.0kb downstream 5.0kb downstream 7617   true scaffold_1: 6524866-6532482 Arabidopsis lyrata
AL1G27600 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 6527483-6532482 Arabidopsis lyrata
AL1G27600 10.0kb upstream 10.0kb upstream 12617   true scaffold_1: 6514866-6527482 Arabidopsis lyrata
AL1G27600 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 6514866-6524865 Arabidopsis lyrata
AL1G27600 10.0kb downstream 10.0kb downstream 12617   true scaffold_1: 6524866-6537482 Arabidopsis lyrata
AL1G27600 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 6527483-6537482 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363716 5261 Brassicaceae View MSA
123838872 5264 Brassicales-Malvales View MSA
124337336 5266 SBM View MSA
124238154 5268 Malvidae View MSA
124068490 5270 Rosid View MSA
123736856 5271 Pentapetalae View MSA
122790484 5272 Eudicot View MSA
122044724 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain