Gene : AL1G28390 A. lyrata v2.1

Defline:  (1 of 2) PTHR23257:SF438 - F3O9.7 PROTEIN-RELATED Genomic Order:  1756
Name:  ? AL1G28390 Secondary Identifier:  ? PAC:35930481

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G28390 0.5kb upstream 0.5kb upstream 5678   true scaffold_1: 6824946-6830623 Arabidopsis lyrata
AL1G28390 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 6824946-6825445 Arabidopsis lyrata
AL1G28390 0.5kb downstream 0.5kb downstream 5678   true scaffold_1: 6825446-6831123 Arabidopsis lyrata
AL1G28390 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 6830624-6831123 Arabidopsis lyrata
AL1G28390 1.0kb upstream 1.0kb upstream 6178   true scaffold_1: 6824446-6830623 Arabidopsis lyrata
AL1G28390 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 6824446-6825445 Arabidopsis lyrata
AL1G28390 1.0kb downstream 1.0kb downstream 6178   true scaffold_1: 6825446-6831623 Arabidopsis lyrata
AL1G28390 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 6830624-6831623 Arabidopsis lyrata
AL1G28390 2.0kb upstream 2.0kb upstream 7178   true scaffold_1: 6823446-6830623 Arabidopsis lyrata
AL1G28390 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 6823446-6825445 Arabidopsis lyrata
AL1G28390 2.0kb downstream 2.0kb downstream 7178   true scaffold_1: 6825446-6832623 Arabidopsis lyrata
AL1G28390 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 6830624-6832623 Arabidopsis lyrata
AL1G28390 5.0kb upstream 5.0kb upstream 10178   true scaffold_1: 6820446-6830623 Arabidopsis lyrata
AL1G28390 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 6820446-6825445 Arabidopsis lyrata
AL1G28390 5.0kb downstream 5.0kb downstream 10178   true scaffold_1: 6825446-6835623 Arabidopsis lyrata
AL1G28390 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 6830624-6835623 Arabidopsis lyrata
AL1G28390 10.0kb upstream 10.0kb upstream 15178   true scaffold_1: 6815446-6830623 Arabidopsis lyrata
AL1G28390 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 6815446-6825445 Arabidopsis lyrata
AL1G28390 10.0kb downstream 10.0kb downstream 15178   true scaffold_1: 6825446-6840623 Arabidopsis lyrata
AL1G28390 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 6830624-6840623 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373301 5261 Brassicaceae View MSA
123800529 5264 Brassicales-Malvales View MSA
124297936 5266 SBM View MSA
124251451 5268 Malvidae View MSA
124066314 5270 Rosid View MSA
123749730 5271 Pentapetalae View MSA
122796699 5272 Eudicot View MSA
122043276 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350927 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain