Gene : AL1G28470 A. lyrata v2.1

Defline:  (1 of 2) 1.1.1.205 - IMP dehydrogenase / Inosinic acid dehydrogenase Genomic Order:  1764
Name:  ? AL1G28470 Secondary Identifier:  ? PAC:35933943

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5695 Arabidopsis lyrata pathologic  
Alyrata PWY-6596 Arabidopsis lyrata pathologic  
Alyrata PWY-7221 Arabidopsis lyrata pathologic  
Alyrata PWY-7228 Arabidopsis lyrata pathologic  
Alyrata PWY-841 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G28470 0.5kb upstream 0.5kb upstream 2738   true scaffold_1: 6854846-6857583 Arabidopsis lyrata
AL1G28470 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 6854846-6855345 Arabidopsis lyrata
AL1G28470 0.5kb downstream 0.5kb downstream 2738   true scaffold_1: 6855346-6858083 Arabidopsis lyrata
AL1G28470 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 6857584-6858083 Arabidopsis lyrata
AL1G28470 1.0kb upstream 1.0kb upstream 3238   true scaffold_1: 6854346-6857583 Arabidopsis lyrata
AL1G28470 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 6854346-6855345 Arabidopsis lyrata
AL1G28470 1.0kb downstream 1.0kb downstream 3238   true scaffold_1: 6855346-6858583 Arabidopsis lyrata
AL1G28470 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 6857584-6858583 Arabidopsis lyrata
AL1G28470 2.0kb upstream 2.0kb upstream 4238   true scaffold_1: 6853346-6857583 Arabidopsis lyrata
AL1G28470 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 6853346-6855345 Arabidopsis lyrata
AL1G28470 2.0kb downstream 2.0kb downstream 4238   true scaffold_1: 6855346-6859583 Arabidopsis lyrata
AL1G28470 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 6857584-6859583 Arabidopsis lyrata
AL1G28470 5.0kb upstream 5.0kb upstream 7238   true scaffold_1: 6850346-6857583 Arabidopsis lyrata
AL1G28470 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 6850346-6855345 Arabidopsis lyrata
AL1G28470 5.0kb downstream 5.0kb downstream 7238   true scaffold_1: 6855346-6862583 Arabidopsis lyrata
AL1G28470 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 6857584-6862583 Arabidopsis lyrata
AL1G28470 10.0kb upstream 10.0kb upstream 12238   true scaffold_1: 6845346-6857583 Arabidopsis lyrata
AL1G28470 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 6845346-6855345 Arabidopsis lyrata
AL1G28470 10.0kb downstream 10.0kb downstream 12238   true scaffold_1: 6855346-6867583 Arabidopsis lyrata
AL1G28470 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 6857584-6867583 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373869 5261 Brassicaceae View MSA
123828071 5264 Brassicales-Malvales View MSA
124336978 5266 SBM View MSA
124244114 5268 Malvidae View MSA
124063330 5270 Rosid View MSA
123738043 5271 Pentapetalae View MSA
122797755 5272 Eudicot View MSA
122042253 5273 Angiosperm View MSA
121346920 5274 Embryophyte View MSA
123424189 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain