Gene : AL1G28110 A. lyrata v2.1

Defline:  (1 of 2) K09753 - cinnamoyl-CoA reductase (CCR) Genomic Order:  1729
Name:  ? AL1G28110 Secondary Identifier:  ? PAC:35932801

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-361 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G28110 0.5kb upstream 0.5kb upstream 3866   true scaffold_1: 6743733-6747598 Arabidopsis lyrata
AL1G28110 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 6743733-6744232 Arabidopsis lyrata
AL1G28110 0.5kb downstream 0.5kb downstream 3866   true scaffold_1: 6744233-6748098 Arabidopsis lyrata
AL1G28110 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 6747599-6748098 Arabidopsis lyrata
AL1G28110 1.0kb upstream 1.0kb upstream 4366   true scaffold_1: 6743233-6747598 Arabidopsis lyrata
AL1G28110 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 6743233-6744232 Arabidopsis lyrata
AL1G28110 1.0kb downstream 1.0kb downstream 4366   true scaffold_1: 6744233-6748598 Arabidopsis lyrata
AL1G28110 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 6747599-6748598 Arabidopsis lyrata
AL1G28110 2.0kb upstream 2.0kb upstream 5366   true scaffold_1: 6742233-6747598 Arabidopsis lyrata
AL1G28110 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 6742233-6744232 Arabidopsis lyrata
AL1G28110 2.0kb downstream 2.0kb downstream 5366   true scaffold_1: 6744233-6749598 Arabidopsis lyrata
AL1G28110 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 6747599-6749598 Arabidopsis lyrata
AL1G28110 5.0kb upstream 5.0kb upstream 8366   true scaffold_1: 6739233-6747598 Arabidopsis lyrata
AL1G28110 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 6739233-6744232 Arabidopsis lyrata
AL1G28110 5.0kb downstream 5.0kb downstream 8366   true scaffold_1: 6744233-6752598 Arabidopsis lyrata
AL1G28110 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 6747599-6752598 Arabidopsis lyrata
AL1G28110 10.0kb upstream 10.0kb upstream 13366   true scaffold_1: 6734233-6747598 Arabidopsis lyrata
AL1G28110 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 6734233-6744232 Arabidopsis lyrata
AL1G28110 10.0kb downstream 10.0kb downstream 13366   true scaffold_1: 6744233-6757598 Arabidopsis lyrata
AL1G28110 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 6747599-6757598 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041043 5273 Angiosperm View MSA
122380734 5261 Brassicaceae View MSA
123829409 5264 Brassicales-Malvales View MSA
124344604 5266 SBM View MSA
124243551 5268 Malvidae View MSA
124063767 5270 Rosid View MSA
123748181 5271 Pentapetalae View MSA
122792644 5272 Eudicot View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain